RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 CXCR4P61073 352 aa17.01■□□□□ 0.31
UBXN4-204ENST00000426921 EGR3Q06889 387 aa17.01■□□□□ 0.31
UBXN4-204ENST00000426921 ATP6AP1Q15904 470 aa17.01■□□□□ 0.31
UBXN4-204ENST00000426921 MIDNQ504T8 468 aa17.01■□□□□ 0.31
UBXN4-204ENST00000426921 CLVS2Q5SYC1 327 aa17.01■□□□□ 0.31
UBXN4-204ENST00000426921 ZNF684Q5T5D7 378 aa17.01■□□□□ 0.31
UBXN4-204ENST00000426921 C12orf73Q69YU5 71 aa17.01■□□□□ 0.31
UBXN4-204ENST00000426921 ASPHD2Q6ICH7 369 aa17.01■□□□□ 0.31
UBXN4-204ENST00000426921 BCDIN3DQ7Z5W3 292 aaKnown RBP17.01■□□□□ 0.31
UBXN4-204ENST00000426921 ZNF573Q86YE8 665 aa17.01■□□□□ 0.31
UBXN4-204ENST00000426921 SLC35F2Q8IXU6 374 aa17.01■□□□□ 0.31
UBXN4-204ENST00000426921 ELMOD2Q8IZ81 293 aa17.01■□□□□ 0.31
UBXN4-204ENST00000426921 BEND2Q8NDZ0 799 aa17.01■□□□□ 0.31
UBXN4-204ENST00000426921 TMEM163Q8TC26 289 aa17.01■□□□□ 0.31
UBXN4-204ENST00000426921 CADM1Q9BY67 442 aaKnown RBP17.01■□□□□ 0.31
UBXN4-204ENST00000426921 MMP27Q9H306 513 aa17.01■□□□□ 0.31
UBXN4-204ENST00000426921 KRT84Q9NSB2 600 aa17.01■□□□□ 0.31
UBXN4-204ENST00000426921 A0A1B0GTI1 187 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 A0A1W2PRD5 423 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 A0A1W2PRF3 423 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 A0A1W2PRM7 423 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 PQLC2LA1A4F0 135 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 M0R129 80 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 DYNC1I1O14576 645 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 MPZP25189 248 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 EPHA2P29317 976 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 ACTR3P61158 418 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 DEFA6Q01524 100 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 PDLIM3Q53GG5 364 aaPredicted RBP17■□□□□ 0.31
UBXN4-204ENST00000426921 KDM4DQ6B0I6 523 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 TCEANCQ8N8B7 351 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 OR14K1Q8NGZ2 314 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 AJUBAQ96IF1 538 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 NRIP2Q9BQI9 281 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 GABARAPL1Q9H0R8 117 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 C19orf12Q9NSK7 152 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 CLN6Q9NWW5 311 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 FAM53CQ9NYF3 392 aa17■□□□□ 0.31
UBXN4-204ENST00000426921 SF3B6Q9Y3B4 125 aaKnown RBP17■□□□□ 0.31
UBXN4-204ENST00000426921 RFPL4AA6NLU0 287 aa16.99■□□□□ 0.31
UBXN4-204ENST00000426921 RFPL4AL1F8VTS6 287 aa16.99■□□□□ 0.31
UBXN4-204ENST00000426921 SYNGR1O43759 233 aa16.99■□□□□ 0.31
UBXN4-204ENST00000426921 MITFO75030 526 aaPredicted RBP16.99■□□□□ 0.31
UBXN4-204ENST00000426921 CCL1P22362 96 aa16.99■□□□□ 0.31
UBXN4-204ENST00000426921 HAAOP46952 286 aa16.99■□□□□ 0.31
UBXN4-204ENST00000426921 BCL2L15Q5TBC7 163 aa16.99■□□□□ 0.31
UBXN4-204ENST00000426921 GID4Q8IVV7 300 aa16.99■□□□□ 0.31
UBXN4-204ENST00000426921 ZNF561Q8N587 486 aa16.99■□□□□ 0.31
UBXN4-204ENST00000426921 CD177Q8N6Q3 437 aa16.99■□□□□ 0.31
UBXN4-204ENST00000426921 APOL4Q9BPW4 351 aa16.99■□□□□ 0.31
UBXN4-204ENST00000426921 RBM4BQ9BQ04 359 aaKnown RBP16.99■□□□□ 0.31
UBXN4-204ENST00000426921 HES4Q9HCC6 221 aa16.99■□□□□ 0.31
UBXN4-204ENST00000426921 MRM2Q9UI43 246 aaKnown RBP16.99■□□□□ 0.31
UBXN4-204ENST00000426921 OR52A1Q9UKL2 312 aa16.99■□□□□ 0.31
UBXN4-204ENST00000426921 POLDIP2Q9Y2S7 368 aa16.99■□□□□ 0.31
UBXN4-204ENST00000426921 NOTCH1P46531 2555 aa16.99■□□□□ 0.31
UBXN4-204ENST00000426921 PRKDCP78527 4128 aaKnown RBP16.98■□□□□ 0.31
UBXN4-204ENST00000426921 ZNF670-ZNF695F2Z2N8 137 aa16.98■□□□□ 0.31
UBXN4-204ENST00000426921 G3V2T6 193 aa16.98■□□□□ 0.31
UBXN4-204ENST00000426921 H0YAE9 185 aa16.98■□□□□ 0.31
UBXN4-204ENST00000426921 FAM185AQ8N0U4 392 aa16.98■□□□□ 0.31
UBXN4-204ENST00000426921 ZNF488Q96MN9 340 aa16.98■□□□□ 0.31
UBXN4-204ENST00000426921 H2AFY2Q9P0M6 372 aaPredicted RBP16.98■□□□□ 0.31
UBXN4-204ENST00000426921 SNX5Q9Y5X3 404 aa16.98■□□□□ 0.31
UBXN4-204ENST00000426921 SLC1A7O00341 560 aa16.97■□□□□ 0.31
UBXN4-204ENST00000426921 MAGEB4O15481 346 aaPredicted RBP16.97■□□□□ 0.31
UBXN4-204ENST00000426921 PRDX2P32119 198 aa16.97■□□□□ 0.31
UBXN4-204ENST00000426921 BNIP1Q12981 228 aa16.97■□□□□ 0.31
UBXN4-204ENST00000426921 AANATQ16613 207 aa16.97■□□□□ 0.31
UBXN4-204ENST00000426921 PLEKHG7Q6ZR37 379 aa16.97■□□□□ 0.31
UBXN4-204ENST00000426921 C11orf42Q8N5U0 333 aa16.97■□□□□ 0.31
UBXN4-204ENST00000426921 C17orf50Q8WW18 174 aa16.97■□□□□ 0.31
UBXN4-204ENST00000426921 MEGF9Q9H1U4 602 aa16.97■□□□□ 0.31
UBXN4-204ENST00000426921 TCF7L1Q9HCS4 588 aa16.97■□□□□ 0.31
UBXN4-204ENST00000426921 GPR173Q9NS66 373 aa16.97■□□□□ 0.31
UBXN4-204ENST00000426921 ENOPH1Q9UHY7 261 aa16.97■□□□□ 0.31
UBXN4-204ENST00000426921 GTF2A1LQ9UNN4 478 aa16.97■□□□□ 0.31
UBXN4-204ENST00000426921 A0A1W2PPH5 198 aa16.96■□□□□ 0.31
UBXN4-204ENST00000426921 ANGPTL7O43827 346 aa16.96■□□□□ 0.31
UBXN4-204ENST00000426921 CAPZA1P52907 286 aa16.96■□□□□ 0.31
UBXN4-204ENST00000426921 ERVK11-1P61568 191 aa16.96■□□□□ 0.31
UBXN4-204ENST00000426921 RPL31P62899 125 aaKnown RBP16.96■□□□□ 0.31
UBXN4-204ENST00000426921 TMEM200BQ69YZ2 307 aa16.96■□□□□ 0.31
UBXN4-204ENST00000426921 ZDHHC13Q8IUH4 622 aa16.96■□□□□ 0.31
UBXN4-204ENST00000426921 MKXQ8IYA7 352 aa16.96■□□□□ 0.31
UBXN4-204ENST00000426921 IL4I1Q96RQ9 567 aa16.96■□□□□ 0.31
UBXN4-204ENST00000426921 PKIBQ9C010 78 aa16.96■□□□□ 0.31
UBXN4-204ENST00000426921 FAM234AQ9H0X4 552 aa16.96■□□□□ 0.31
UBXN4-204ENST00000426921 FBLN5Q9UBX5 448 aa16.96■□□□□ 0.31
UBXN4-204ENST00000426921 WARS2Q9UGM6 360 aaKnown RBP16.96■□□□□ 0.31
UBXN4-204ENST00000426921 H3BUX3 64 aa16.95■□□□□ 0.3
UBXN4-204ENST00000426921 NXPH2O95156 264 aa16.95■□□□□ 0.3
UBXN4-204ENST00000426921 FASP25445 335 aa16.95■□□□□ 0.3
UBXN4-204ENST00000426921 CEBPDP49716 269 aaPredicted RBP16.95■□□□□ 0.3
UBXN4-204ENST00000426921 IL24Q13007 206 aa16.95■□□□□ 0.3
UBXN4-204ENST00000426921 CRIP3Q6Q6R5 217 aa16.95■□□□□ 0.3
UBXN4-204ENST00000426921 SSX6Q7RTT6 188 aa16.95■□□□□ 0.3
UBXN4-204ENST00000426921 OR51G2Q8NGK0 314 aa16.95■□□□□ 0.3
UBXN4-204ENST00000426921 USE1Q9NZ43 259 aa16.95■□□□□ 0.3
UBXN4-204ENST00000426921 SLC22A13Q9Y226 551 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms