RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 CRLF2Q9HC73 371 aa11.74□□□□□ -0.53
USP42-203ENST00000426246 SPTBN1Q01082 2364 aaKnown RBP11.74□□□□□ -0.53
USP42-203ENST00000426246 IGLV3-12A0A075B6K2 115 aa11.74□□□□□ -0.53
USP42-203ENST00000426246 GPR37O15354 613 aa11.74□□□□□ -0.53
USP42-203ENST00000426246 CCL3P10147 92 aa11.74□□□□□ -0.53
USP42-203ENST00000426246 RPL12P30050 165 aaKnown RBP11.74□□□□□ -0.53
USP42-203ENST00000426246 ROM1Q03395 351 aa11.74□□□□□ -0.53
USP42-203ENST00000426246 SLC22A25Q6T423 547 aa11.74□□□□□ -0.53
USP42-203ENST00000426246 FBXL14Q8N1E6 418 aa11.74□□□□□ -0.53
USP42-203ENST00000426246 OR5L2Q8NGL0 311 aa11.74□□□□□ -0.53
USP42-203ENST00000426246 NANPQ8TBE9 248 aa11.74□□□□□ -0.53
USP42-203ENST00000426246 CCDC74BQ96LY2 380 aa11.74□□□□□ -0.53
USP42-203ENST00000426246 PIGMQ9H3S5 423 aa11.74□□□□□ -0.53
USP42-203ENST00000426246 CYB5R1Q9UHQ9 305 aa11.74□□□□□ -0.53
USP42-203ENST00000426246 WRBO00258 174 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 NTN3O00634 580 aaPredicted RBP11.73□□□□□ -0.53
USP42-203ENST00000426246 AQP8O94778 261 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 DUS4LO95620 317 aaKnown RBP11.73□□□□□ -0.53
USP42-203ENST00000426246 SFTA3P0C7M3 94 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 MUC1P15941 1255 aaPredicted RBP11.73□□□□□ -0.53
USP42-203ENST00000426246 DBX2Q6ZNG2 339 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 TMEM182Q6ZP80 229 aaPredicted RBP11.73□□□□□ -0.53
USP42-203ENST00000426246 HSD17B13Q7Z5P4 300 aaPredicted RBP11.73□□□□□ -0.53
USP42-203ENST00000426246 OR5T1Q8NG75 326 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 RASL10BQ96S79 203 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 TGIF2Q9GZN2 237 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 B3GALT5Q9Y2C3 310 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 SNAI3Q3KNW1 292 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 FBXW12Q6X9E4 464 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 LYZL2Q7Z4W2 148 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 NOXO1Q8NFA2 376 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 OR8U1Q8NH10 309 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 IFI44Q8TCB0 444 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 PIK3IP1Q96FE7 263 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 SLCO5A1Q9H2Y9 848 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 SPACA1Q9HBV2 294 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 FBXL17Q9UF56 701 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 WIF1Q9Y5W5 379 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 ANKUB1A6NFN9 424 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 CDRT15L2A8MXV6 281 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 CXCL13O43927 109 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 CRYBA1P05813 215 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 HERV-K104P61576 105 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 UBE2V2Q15819 145 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 IZUMO4Q1ZYL8 232 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 PLCXD3Q63HM9 321 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 SGCZQ96LD1 299 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 EXPH5Q8NEV8 1989 aa11.73□□□□□ -0.53
USP42-203ENST00000426246 GEMIN2O14893 280 aaKnown RBP11.72□□□□□ -0.53
USP42-203ENST00000426246 HPNP05981 417 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 LPAR6P43657 344 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 MMP16P51512 607 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 HAGHQ16775 308 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 PHYHD1Q5SRE7 291 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 MRGPRFQ96AM1 343 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 BSCL2Q96G97 398 aaPredicted RBP11.72□□□□□ -0.53
USP42-203ENST00000426246 MFRPQ9BY79 579 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 UBE2J1Q9Y385 318 aaPredicted RBP11.72□□□□□ -0.53
USP42-203ENST00000426246 IGKV1-9A0A0C4DH69 117 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 hCG_1809904A0A1W2PP81 198 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 A0A1W2PR64 198 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 A0A1W2PRV1 198 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 FTCDNL1E5RQL4 147 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 S100A9P06702 114 aaKnown RBP11.72□□□□□ -0.53
USP42-203ENST00000426246 OR5AC1P0C628 307 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 TMEM33P57088 247 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 ACACAQ13085 2346 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 THEM4Q5T1C6 240 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 GPR137CQ8N3F9 429 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 ESX1Q8N693 406 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 AQP3Q92482 292 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 NAT6Q93015 286 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 SLC5A7Q9GZV3 580 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 PADI1Q9ULC6 663 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 KCNIP3Q9Y2W7 256 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 MEMO1Q9Y316 297 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 MMP24Q9Y5R2 645 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 CER1O95813 267 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 BPNT1O95861 308 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 NHLH2Q02577 135 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 TCEAL6Q6IPX3 200 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 ZFP62Q8NB50 900 aaPredicted RBP11.72□□□□□ -0.53
USP42-203ENST00000426246 TCEAL3Q969E4 200 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 PLPPR2Q96GM1 343 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 UQCC1Q9NVA1 299 aa11.72□□□□□ -0.53
USP42-203ENST00000426246 MCTS1Q9ULC4 181 aaKnown RBP11.72□□□□□ -0.53
USP42-203ENST00000426246 SGCEO43556 437 aa11.71□□□□□ -0.53
USP42-203ENST00000426246 CD79AP11912 226 aa11.71□□□□□ -0.53
USP42-203ENST00000426246 CTRB1P17538 263 aa11.71□□□□□ -0.53
USP42-203ENST00000426246 RIPPLY1Q0D2K3 151 aa11.71□□□□□ -0.53
USP42-203ENST00000426246 WIPI1Q5MNZ9 446 aaPredicted RBP11.71□□□□□ -0.53
USP42-203ENST00000426246 CTRB2Q6GPI1 263 aa11.71□□□□□ -0.53
USP42-203ENST00000426246 OVCH2Q7RTZ1 564 aa11.71□□□□□ -0.53
USP42-203ENST00000426246 OR6S1Q8NH40 331 aa11.71□□□□□ -0.53
USP42-203ENST00000426246 OR51H1Q8NH63 302 aa11.71□□□□□ -0.53
USP42-203ENST00000426246 TP53I11O14683 189 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 HS3ST1O14792 307 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 RBMXL2O75526 392 aaKnown RBP11.71□□□□□ -0.54
USP42-203ENST00000426246 CBX5P45973 191 aa11.71□□□□□ -0.54
USP42-203ENST00000426246 PPA1Q15181 289 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms