RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 NDUFB7P17568 137 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 HAAOP46952 286 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 CAPZA1P52907 286 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 BPIFB3P59826 476 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 ACTC1P68032 377 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 ACTA1P68133 377 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 DEFB112Q30KQ8 113 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 CDONQ4KMG0 1287 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 ATPAF1Q5TC12 328 aaPredicted RBP10.48□□□□□ -0.73
SGCE-203ENST00000425444 ZNF788Q6ZQV5 615 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 KRT74Q7RTS7 529 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 VMO1Q7Z5L0 202 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 CATSPERDQ86XM0 798 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 ZNF573Q86YE8 665 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 KIR3DL3Q8N743 410 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 TMEM185AQ8NFB2 350 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 ANGPTL6Q8NI99 470 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 AQP3Q92482 292 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 RNFT2Q96EX2 444 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 MED30Q96HR3 178 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 HRASLS5Q96KN8 279 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 GAFA1Q96PS6 74 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 C9orf16Q9BUW7 83 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 ACOXLQ9NUZ1 547 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 SLC25A10Q9UBX3 287 aaPredicted RBP10.48□□□□□ -0.73
SGCE-203ENST00000425444 GMPPBQ9Y5P6 360 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 KPTNQ9Y664 436 aa10.48□□□□□ -0.73
SGCE-203ENST00000425444 CENPVL3A0A0U1RRI6 287 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 A0A1B0GTI1 187 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 A0A1W2PQ09 198 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 J3QT63 122 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 SIGLEC5O15389 551 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 HOXA3O43365 443 aaPredicted RBP10.47□□□□□ -0.73
SGCE-203ENST00000425444 AMY2BP19961 511 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 TGM4P49221 684 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 SLC9A3R2Q15599 337 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 DGUOKQ16854 277 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 TUSC1Q2TAM9 212 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 SMIM21Q3B7S5 101 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 TP53I3Q53FA7 332 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 MEDAGQ5VYS4 303 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 PDZD9Q8IXQ8 264 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 POC1AQ8NBT0 407 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 TRMT10AQ8TBZ6 339 aaKnown RBP10.47□□□□□ -0.73
SGCE-203ENST00000425444 NPRL2Q8WTW4 380 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 RORBQ92753 470 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 ZNF488Q96MN9 340 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 CITED1Q99966 193 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 DCTN5Q9BTE1 182 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 SIRPDQ9H106 197 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 S100A14Q9HCY8 104 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 TNFRSF19Q9NS68 423 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 SLC7A11Q9UPY5 501 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 POLDIP2Q9Y2S7 368 aa10.47□□□□□ -0.73
SGCE-203ENST00000425444 EPPK1P58107 5090 aaKnown RBP10.47□□□□□ -0.73
SGCE-203ENST00000425444 IGHV1-69DA0A0B4J2H0 117 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 A0A1B0GUS0 222 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 FAM230AA0A1W2PPH8 454 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 DAPL1A0PJW8 107 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 ANKRD61A6NGH8 418 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 CLDN34H7C241 214 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 SYNGR1O43759 233 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 GATBO75879 557 aaKnown RBP10.46□□□□□ -0.73
SGCE-203ENST00000425444 NXPH2O95156 264 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 IGHV1-69P01742 117 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 PRB2P02812 416 aaPredicted RBP10.46□□□□□ -0.73
SGCE-203ENST00000425444 ACAA1P09110 424 aaPredicted RBP10.46□□□□□ -0.73
SGCE-203ENST00000425444 UBCP0CG48 685 aaKnown RBP10.46□□□□□ -0.73
SGCE-203ENST00000425444 PSG2P11465 335 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 CCL1P22362 96 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 SNRPGP62308 76 aaKnown RBP10.46□□□□□ -0.73
SGCE-203ENST00000425444 ZNF85Q03923 595 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 TMEM42Q69YG0 159 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 BATF2Q8N1L9 274 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 PQLC1Q8N2U9 271 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 LY6G5BQ8NDX9 201 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 FAM110DQ8TAY7 271 aaPredicted RBP10.46□□□□□ -0.73
SGCE-203ENST00000425444 STMN2Q93045 179 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 MBOAT4Q96T53 435 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 BEX1Q9HBH7 125 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 SIRT7Q9NRC8 400 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 RASL12Q9NYN1 266 aa10.46□□□□□ -0.73
SGCE-203ENST00000425444 DNAH9Q9NYC9 4486 aa10.45□□□□□ -0.74
SGCE-203ENST00000425444 IGKV1D-17A0A075B6S4 117 aa10.45□□□□□ -0.74
SGCE-203ENST00000425444 LOC107986453A0A1B0GWG9 222 aa10.45□□□□□ -0.74
SGCE-203ENST00000425444 PQLC2LA1A4F0 135 aa10.45□□□□□ -0.74
SGCE-203ENST00000425444 BAG2O95816 211 aa10.45□□□□□ -0.74
SGCE-203ENST00000425444 SERPINA3P01011 423 aa10.45□□□□□ -0.74
SGCE-203ENST00000425444 PGA5P0DJD9 388 aa10.45□□□□□ -0.74
SGCE-203ENST00000425444 CAV3P56539 151 aa10.45□□□□□ -0.74
SGCE-203ENST00000425444 VAX1Q5SQQ9 334 aa10.45□□□□□ -0.74
SGCE-203ENST00000425444 ASPHD2Q6ICH7 369 aa10.45□□□□□ -0.74
SGCE-203ENST00000425444 C16orf87Q6PH81 154 aa10.45□□□□□ -0.74
SGCE-203ENST00000425444 ACP7Q6ZNF0 438 aa10.45□□□□□ -0.74
SGCE-203ENST00000425444 ZBTB49Q6ZSB9 765 aa10.45□□□□□ -0.74
SGCE-203ENST00000425444 FAM185AQ8N0U4 392 aa10.45□□□□□ -0.74
SGCE-203ENST00000425444 PRSS35Q8N3Z0 413 aa10.45□□□□□ -0.74
SGCE-203ENST00000425444 ZNRF1Q8ND25 227 aa10.45□□□□□ -0.74
SGCE-203ENST00000425444 CCDC54Q8NEL0 328 aa10.45□□□□□ -0.74
SGCE-203ENST00000425444 C8orf46Q8TAG6 207 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms