RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 ZFP90Q8TF47 636 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 CYGBQ8WWM9 190 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 YIPF5Q969M3 257 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 C11orf52Q96A22 123 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 PPCDCQ96CD2 204 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 HAUS1Q96CS2 278 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 C18orf12Q96KH6 178 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 BIRC8Q96P09 236 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 PFDN5Q99471 154 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 SULT4A1Q9BR01 284 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 FAAP24Q9BTP7 215 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 TM2D1Q9BX74 207 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 OR51I1Q9H343 314 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 RNF167Q9H6Y7 350 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 RPF2Q9H7B2 306 aaKnown RBP2.97□□□□□ -1.93
SF3B1-205ENST00000424674 EBF2Q9HAK2 575 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 TMEM9BQ9NQ34 198 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 CALYQ9NYX4 217 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 OPTCQ9UBM4 332 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 VSIG4Q9Y279 399 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 PRELID3BQ9Y3B1 194 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 FBXO7Q9Y3I1 522 aa2.97□□□□□ -1.93
SF3B1-205ENST00000424674 IGHV3OR16-12A0A075B7B8 117 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 A0A087WUJ7 227 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 IGHV3-20A0A0C4DH32 117 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 A0A0U1RQV1 116 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 A0A1W2PQ67 120 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 A0A1W2PS18 150 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 ZNF726A6NNF4 738 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 NPIPB9F8W1W9 429 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 K7EQD1 137 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 MANBAO00462 879 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 PFDN1O60925 122 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 ATG12O94817 140 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 GLUD1P00367 558 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 CYB5R3P00387 301 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-205ENST00000424674 MT-CO2P00403 227 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 TSHBP01222 138 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 IGHG1P01857 330 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 HCKP08631 526 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 IL3P08700 152 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 MMP7P09237 267 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-205ENST00000424674 PLA2G2AP14555 144 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 FOLR1P15328 257 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 GNB3P16520 340 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 TAC1P20366 129 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 SLC6A1P30531 599 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 TSPOP30536 169 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 GCKP35557 465 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 PAX9P55771 341 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 TAS2R43P59537 309 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 PFN3P60673 137 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 NAA20P61599 178 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 GNG3P63215 75 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 SLC7A9P82251 487 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 MXD1Q05195 221 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 Q0VFX4 171 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 TEAD2Q15562 447 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 SNRNP35Q16560 246 aaKnown RBP2.96□□□□□ -1.94
SF3B1-205ENST00000424674 TRMT12Q53H54 448 aaKnown RBP2.96□□□□□ -1.94
SF3B1-205ENST00000424674 FAM78BQ5VT40 261 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 KCTD16Q68DU8 428 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 ZNF324BQ6AW86 544 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-205ENST00000424674 ZFP1Q6P2D0 407 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 IDO2Q6ZQW0 420 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 C18orf65Q6ZTR6 163 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 FAM183BPQ6ZVS7 135 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 ZNF771Q7L3S4 317 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-205ENST00000424674 ZNF571Q7Z3V5 609 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-205ENST00000424674 ZNF843Q8N446 348 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 ZNRF1Q8ND25 227 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 OR4P4Q8NGL7 312 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 OR1L8Q8NGR8 309 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 LRRC58Q96CX6 371 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 DCUN1D1Q96GG9 259 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 ST6GAL2Q96JF0 529 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 PGLYRP4Q96LB8 373 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 RDH12Q96NR8 316 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 OR2M4Q96R27 311 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 HIST1H4GQ99525 98 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 TAPBPLQ9BX59 468 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 CCDC90BQ9GZT6 254 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 RBM38Q9H0Z9 239 aaKnown RBP2.96□□□□□ -1.94
SF3B1-205ENST00000424674 DCSTAMPQ9H295 470 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 FBXL15Q9H469 300 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 METTL17Q9H7H0 456 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-205ENST00000424674 GSKIPQ9P0R6 139 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 RARRES3Q9UL19 164 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 ZNF256Q9Y2P7 627 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-205ENST00000424674 ZNF257Q9Y2Q1 563 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 FAM32AQ9Y421 112 aaKnown RBP2.96□□□□□ -1.94
SF3B1-205ENST00000424674 SLC22A7Q9Y694 548 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 V9GY05 133 aa2.96□□□□□ -1.94
SF3B1-205ENST00000424674 SYNMO15061 1565 aa2.95□□□□□ -1.94
SF3B1-205ENST00000424674 CCDC144AA2RUR9 1427 aa2.95□□□□□ -1.94
SF3B1-205ENST00000424674 TRAV39A0A0B4J263 110 aa2.95□□□□□ -1.94
SF3B1-205ENST00000424674 TEX50A0A1B0GTY4 177 aa2.95□□□□□ -1.94
SF3B1-205ENST00000424674 MSGN1A6NI15 193 aa2.95□□□□□ -1.94
SF3B1-205ENST00000424674 TRIM49D1C9J1S8 452 aa2.95□□□□□ -1.94
SF3B1-205ENST00000424674 F8W036 122 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms