RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 SLC35F2Q8IXU6 374 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 PNKDQ8N490 385 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 ZNRF1Q8ND25 227 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 OR5K1Q8NHB7 308 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 TTTY10Q9BZA0 68 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 C19orf12Q9NSK7 152 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.44□□□□□ -0.94e-8■■□□□ 14.3
SQSTM1-203ENST00000422245 GTF2A1LQ9UNN4 478 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 R4GMQ9 66 aa9.44□□□□□ -0.9
SQSTM1-203ENST00000422245 ANKRD61A6NGH8 418 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 ZNF670-ZNF695F2Z2N8 137 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 DLGAP1O14490 977 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 NOS1APO75052 506 aaPredicted RBP9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 SRSF10O75494 262 aaKnown RBP9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 PGA5P0DJD9 388 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 HAAOP46952 286 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 DAPP51397 102 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 CXCR4P61073 352 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 RPL31P62899 125 aaKnown RBP9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 EGR3Q06889 387 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 AANATQ16613 207 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 C2orf68Q2NKX9 166 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 SLX4IPQ5VYV7 408 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 NXNL2Q5VZ03 156 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 HCP5Q6MZN7 132 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 MEPCEQ7L2J0 689 aaKnown RBP9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 GID4Q8IVV7 300 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 ELMOD2Q8IZ81 293 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 ZNF561Q8N587 486 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 OR51G2Q8NGK0 314 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 TMEM163Q8TC26 289 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 UTP4Q969X6 686 aaKnown RBP9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 SLC7A6OSQ96CW6 309 aaPredicted RBP9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 NRIP2Q9BQI9 281 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 FAM234AQ9H0X4 552 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 ADGRL4Q9HBW9 690 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 KRT84Q9NSB2 600 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 CLN6Q9NWW5 311 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 USE1Q9NZ43 259 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 H2AFY2Q9P0M6 372 aaPredicted RBP9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 ENOPH1Q9UHY7 261 aa9.43□□□□□ -0.9
SQSTM1-203ENST00000422245 hCG_1809904A0A1W2PP81 198 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 A0A1W2PPE2 198 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 A0A1W2PR64 198 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 A0A1W2PRV1 198 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 PQLC2LA1A4F0 135 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 RFPL4AA6NLU0 287 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 ZAR1LA6NP61 321 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 RFPL4AL1F8VTS6 287 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 H3BUX3 64 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 SYNGR1O43759 233 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 NXPH2O95156 264 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 MPZP25189 248 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 GABRA5P31644 462 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 ATP6AP1Q15904 470 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 LRRC75BQ2VPJ9 315 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 DMRTC1Q5HYR2 192 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 AADACL4Q5VUY2 407 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 C12orf73Q69YU5 71 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 C11orf88Q6PI97 169 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 LIAT1Q6ZQX7 453 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 CD177Q8N6Q3 437 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 TCEANCQ8N8B7 351 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 OR4C13Q8NGP0 309 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 ZNF488Q96MN9 340 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 GABARAPL1Q9H0R8 117 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 PPA2Q9H2U2 334 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 HEXA-AS1Q9H8Q6 139 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 RAB18Q9NP72 206 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 GPR173Q9NS66 373 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 OR52A1Q9UKL2 312 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 SNX5Q9Y5X3 404 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 V9GYS6 101 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 TGP01266 2768 aa9.42□□□□□ -0.9
SQSTM1-203ENST00000422245 M0R129 80 aa9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 MITFO75030 526 aaPredicted RBP9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 CCL1P22362 96 aa9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 PRDX2P32119 198 aa9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 Q6ZSR3 168 aa9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 ASRGL1Q7L266 308 aa9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 BCDIN3DQ7Z5W3 292 aaKnown RBP9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 MKXQ8IYA7 352 aa9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 OR14K1Q8NGZ2 314 aa9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 BCAS4Q8TDM0 211 aa9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 PPP1R14AQ96A00 147 aa9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 SSX3Q99909 188 aa9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 APOL4Q9BPW4 351 aa9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 PKIBQ9C010 78 aa9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 RANBP3Q9H6Z4 567 aaPredicted RBP9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 PLEKHA1Q9HB21 404 aa9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 HES4Q9HCC6 221 aa9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 FBLN5Q9UBX5 448 aa9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 MRM2Q9UI43 246 aaKnown RBP9.41□□□□□ -0.9
SQSTM1-203ENST00000422245 TET2Q6N021 2002 aaPredicted RBP9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 A0A1B0GTI1 187 aa9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 G3V2T6 193 aa9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 TSPAN15O95858 294 aa9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 KRT8P05787 483 aa9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 ERVFRD-1P60508 538 aa9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 EFNB1P98172 346 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms