RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 CPEB3Q8NE35 698 aaKnown RBP9.53□□□□□ -0.88
DDX56-203ENST00000421223 AIFM2Q9BRQ8 373 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 ALX4Q9H161 411 aaPredicted RBP9.53□□□□□ -0.88
DDX56-203ENST00000421223 IGKV1D-8A0A087WSZ0 117 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 TUBAL3A6NHL2 446 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 ZNF850A8MQ14 1090 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 ZNF587BE7ETH6 402 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 HSPB6O14558 160 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 HOXB5P09067 269 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 CST2P09228 141 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 ZNF883P0CG24 379 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 UBBP0CG47 229 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 PRF1P14222 555 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 CPT2P23786 658 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 ZBTB25P24278 435 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 SERPINF1P36955 418 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 H3F3CQ6NXT2 135 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 ADGRG7Q96K78 797 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 CXorf58Q96LI9 332 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 ZNF471Q9BX82 626 aaPredicted RBP9.53□□□□□ -0.88
DDX56-203ENST00000421223 METTL9Q9H1A3 318 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 PPA2Q9H2U2 334 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 ZNF703Q9H7S9 590 aaPredicted RBP9.53□□□□□ -0.88
DDX56-203ENST00000421223 ZNF629Q9UEG4 869 aaPredicted RBP9.53□□□□□ -0.88
DDX56-203ENST00000421223 MCTS1Q9ULC4 181 aaKnown RBP9.53□□□□□ -0.88
DDX56-203ENST00000421223 V9GYS6 101 aa9.53□□□□□ -0.88
DDX56-203ENST00000421223 DSPP15924 2871 aaKnown RBP9.52□□□□□ -0.88
DDX56-203ENST00000421223 OTOGLQ3ZCN5 2332 aa9.52□□□□□ -0.88
DDX56-203ENST00000421223 IGKV1-27A0A075B6S5 117 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 TRAV14DV4A0A0A6YYC5 116 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 IGHV3-64DA0A0J9YX35 117 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 C3orf80F5H4A9 247 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 MFNGO00587 321 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 CTRB1P17538 263 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 GSK3AP49840 483 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 RBP2P50120 134 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 MEOX1P50221 254 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 FXYD4P59646 89 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 POLR2GP62487 172 aaKnown RBP eCLIP9.52□□□□□ -0.89
DDX56-203ENST00000421223 ARG2P78540 354 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 SRSF6Q13247 344 aaKnown RBP9.52□□□□□ -0.89
DDX56-203ENST00000421223 CTRB2Q6GPI1 263 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 TMEM17Q86X19 198 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 FBXL14Q8N1E6 418 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 OR5M8Q8NGP6 311 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 PAPOLGQ9BWT3 736 aaKnown RBP9.52□□□□□ -0.89
DDX56-203ENST00000421223 PRR14LQ5THK1 2151 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 SPAARA0A1B0GVQ0 90 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 A0A1W2PR80 420 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 GEMIN2O14893 280 aaKnown RBP9.52□□□□□ -0.89
DDX56-203ENST00000421223 SNAPC5O75971 98 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 CRYGSP22914 178 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 OTX1P32242 354 aaPredicted RBP9.52□□□□□ -0.89
DDX56-203ENST00000421223 PMP22Q01453 160 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 CRIP3Q6Q6R5 217 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 UNQ6126/PRO20091Q6UXV3 157 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 OR51F2Q8NH61 342 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 THAP6Q8TBB0 222 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 CDC6Q99741 560 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 GPR87Q9BY21 358 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 KIF25Q9UIL4 384 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 NUP50Q9UKX7 468 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 SLC7A11Q9UPY5 501 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 DMXL1Q9Y485 3027 aa9.52□□□□□ -0.89
DDX56-203ENST00000421223 RFPL4AA6NLU0 287 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 MPTX1A8MV57 137 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 RFPL4AL1F8VTS6 287 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 CYTIPO60759 359 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 SFTPBP07988 381 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 DUSP1P28562 367 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 HIST1H3AP68431 136 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 TRIP6Q15654 476 aaKnown RBP9.51□□□□□ -0.89
DDX56-203ENST00000421223 HIST2H3PS2Q5TEC6 136 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 HIST2H3AQ71DI3 136 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 CDH26Q8IXH8 852 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 DEFB124Q8NES8 71 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 OR13G1Q8NGZ3 307 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 LRRC20Q8TCA0 184 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 VRK1Q99986 396 aaPredicted RBP9.51□□□□□ -0.89
DDX56-203ENST00000421223 SPRY4Q9C004 299 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 C5orf66Q9H5L9 145 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 CSAG2Q9Y5P2 127 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 LIPGQ9Y5X9 500 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 PCSK5Q92824 1860 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 DHRS7CA6NNS2 312 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 B8ZZF3 427 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 DNPH1O43598 174 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 OR7C1O76099 320 aaPredicted RBP9.51□□□□□ -0.89
DDX56-203ENST00000421223 LHX2P50458 406 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 CCL11P51671 97 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 PCBD1P61457 104 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 IGFBP7Q16270 282 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 TMEM65Q6PI78 240 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 FOXL2NBQ6ZUU3 175 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 SLC25A26Q70HW3 274 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 ZNF75AQ96N20 296 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 CMSS1Q9BQ75 279 aaKnown RBP9.51□□□□□ -0.89
DDX56-203ENST00000421223 ZNF2Q9BSG1 426 aaPredicted RBP9.51□□□□□ -0.89
DDX56-203ENST00000421223 MBD2Q9UBB5 411 aa9.51□□□□□ -0.89
DDX56-203ENST00000421223 OR6C6A6NF89 314 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms