RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 CNN3Q15417 329 aaKnown RBP10.35□□□□□ -0.75
LINC00339-203ENST00000420503 OR2T27Q8NH04 317 aa10.35□□□□□ -0.75
LINC00339-203ENST00000420503 OTOSQ8NHW6 89 aa10.35□□□□□ -0.75
LINC00339-203ENST00000420503 MUC13Q9H3R2 512 aa10.35□□□□□ -0.75
LINC00339-203ENST00000420503 RGCCQ9H4X1 137 aa10.35□□□□□ -0.75
LINC00339-203ENST00000420503 RAB18Q9NP72 206 aa10.35□□□□□ -0.75
LINC00339-203ENST00000420503 ACTR3BQ9P1U1 418 aa10.35□□□□□ -0.75
LINC00339-203ENST00000420503 OR14J1Q9UGF5 321 aa10.35□□□□□ -0.75
LINC00339-203ENST00000420503 A6NIN4 97 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 VGLL3A8MV65 326 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 ODF3BA8MYP8 253 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 GYG2O15488 501 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 KRT36O76013 467 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 IFNGP01579 166 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 ARG1P05089 322 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 ZNF3P17036 446 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 CD24P25063 80 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 HOXD3P31249 432 aaPredicted RBP10.34□□□□□ -0.75
LINC00339-203ENST00000420503 PRDX2P32119 198 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 MAGEA2P43356 314 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 GNG3P63215 75 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 CBX1P83916 185 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 MFGE8Q08431 387 aaPredicted RBP10.34□□□□□ -0.75
LINC00339-203ENST00000420503 TRIM25Q14258 630 aaKnown RBP10.34□□□□□ -0.75
LINC00339-203ENST00000420503 DNAL1Q4LDG9 190 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 PLCXD3Q63HM9 321 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 POC1AQ8NBT0 407 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 OR4F17Q8NGA8 305 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 FAM81AQ8TBF8 368 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 OR4F4Q96R69 305 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 TEAD3Q99594 435 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 OCSTAMPQ9BR26 566 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 THTPAQ9BU02 230 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 NIPAL2Q9H841 368 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 HEXA-AS1Q9H8Q6 139 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 FAM206AQ9NX38 181 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 BAIAP2Q9UQB8 552 aa10.34□□□□□ -0.75
LINC00339-203ENST00000420503 SAMHD1Q9Y3Z3 626 aaKnown RBP10.34□□□□□ -0.75
LINC00339-203ENST00000420503 F8VVB4 439 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 F8VWA3 439 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 MAGEB4O15481 346 aaPredicted RBP10.33□□□□□ -0.76
LINC00339-203ENST00000420503 MRPL3P09001 348 aaKnown RBP10.33□□□□□ -0.76
LINC00339-203ENST00000420503 CD33P20138 364 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 LGALS4P56470 323 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 EMX1Q04741 257 aaPredicted RBP10.33□□□□□ -0.76
LINC00339-203ENST00000420503 MICAQ29983 383 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 CEACAM21Q3KPI0 293 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 LCN8Q6JVE9 175 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 BAIAP2L2Q6UXY1 529 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 LIAT1Q6ZQX7 453 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 CCDC121Q6ZUS5 278 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 SHFQ7M4L6 423 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 TMEM179BQ7Z7N9 219 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.33□□□□□ -0.76
LINC00339-203ENST00000420503 FTMTQ8N4E7 242 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 WFDC9Q8NEX5 89 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 OR10G2Q8NGC3 310 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 OR51E1Q8TCB6 317 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 ASB9Q96DX5 294 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 HIST1H2AAQ96QV6 131 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 OR8B4Q96RC9 309 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 DGCR6LQ9BY27 220 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 GPR84Q9NQS5 396 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 GPR173Q9NS66 373 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 USE1Q9NZ43 259 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 COPS3Q9UNS2 423 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 HILPDAQ9Y5L2 63 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 KIAA2026Q5HYC2 2103 aa10.33□□□□□ -0.76
LINC00339-203ENST00000420503 C17orf98A8MV24 154 aa10.32□□□□□ -0.76
LINC00339-203ENST00000420503 GSC2O15499 205 aa10.32□□□□□ -0.76
LINC00339-203ENST00000420503 DNAJC8O75937 253 aaPredicted RBP10.32□□□□□ -0.76
LINC00339-203ENST00000420503 ATP5HO75947 161 aa10.32□□□□□ -0.76
LINC00339-203ENST00000420503 INMTO95050 263 aa10.32□□□□□ -0.76
LINC00339-203ENST00000420503 APOC1P02654 83 aa10.32□□□□□ -0.76
LINC00339-203ENST00000420503 PGA5P0DJD9 388 aa10.32□□□□□ -0.76
LINC00339-203ENST00000420503 BLVRAP53004 296 aa10.32□□□□□ -0.76
LINC00339-203ENST00000420503 CD83Q01151 205 aa10.32□□□□□ -0.76
LINC00339-203ENST00000420503 DEFB121Q5J5C9 76 aa10.32□□□□□ -0.76
LINC00339-203ENST00000420503 PLEKHG7Q6ZR37 379 aa10.32□□□□□ -0.76
LINC00339-203ENST00000420503 COMMD2Q86X83 199 aa10.32□□□□□ -0.76
LINC00339-203ENST00000420503 HS3ST5Q8IZT8 346 aa10.32□□□□□ -0.76
LINC00339-203ENST00000420503 TPRX1Q8N7U7 411 aa10.32□□□□□ -0.76
LINC00339-203ENST00000420503 OR5AU1Q8NGC0 362 aa10.32□□□□□ -0.76
LINC00339-203ENST00000420503 TEX47Q8TBZ9 253 aa10.32□□□□□ -0.76
LINC00339-203ENST00000420503 NRIP2Q9BQI9 281 aa10.32□□□□□ -0.76
LINC00339-203ENST00000420503 CADM1Q9BY67 442 aaKnown RBP10.32□□□□□ -0.76
LINC00339-203ENST00000420503 PRSS22Q9GZN4 317 aa10.32□□□□□ -0.76
LINC00339-203ENST00000420503 PIGLQ9Y2B2 252 aa10.32□□□□□ -0.76
LINC00339-203ENST00000420503 H3BN98 237 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 H3BSH0 61 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 MMP23AO75900 390 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 IGLV3-1P01715 115 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 TK1P04183 234 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 ALOX5APP20292 161 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 SLC2A5P22732 501 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 VDAC2P45880 294 aaPredicted RBP10.31□□□□□ -0.76
LINC00339-203ENST00000420503 HAAOP46952 286 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 RASSF2P50749 326 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 COL10A1Q03692 680 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 DYNC1I2Q13409 638 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms