RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 GATA4P43694 442 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 OR3A4PP47883 348 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 CLDN12P56749 244 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 UNC119Q13432 240 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 OR8G1Q15617 311 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 ZNF672Q499Z4 452 aaPredicted RBP12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 RNF144BQ7Z419 303 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 CMTM4Q8IZR5 234 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 GDPD1Q8N9F7 314 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 BHLHE23Q8NDY6 225 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 OR8S1Q8NH09 359 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 TNFAIP8L1Q8WVP5 186 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 ERGIC1Q969X5 290 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 ADAT1Q9BUB4 502 aaKnown RBP12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 CCDC32Q9BV29 185 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 MRPL37Q9BZE1 423 aaKnown RBP12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 METTL9Q9H1A3 318 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 NKIRAS2Q9NYR9 191 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 ANKHD1Q8IWZ3 2542 aaKnown RBP12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 HCFC1P51610 2035 aa12.13□□□□□ -0.47
SHMT1P1-201ENST00000419974 PLSCR5A0PG75 271 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM221AA4D161 298 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 METTL21EPA6NDL7 271 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM90A10PA6NDY2 464 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM90A18PA6NE21 464 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM90A16PA6NEW6 464 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM90A20PA6NIJ5 464 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM90A8PA6NJQ4 464 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM90A7PA6NKC0 464 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM90A22PA8MWA6 464 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM90A12PA8MX19 464 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM90A5PA8MXJ8 464 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM90A23PA8MXZ1 464 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 E7EQL1 145 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 J3QT63 122 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 TPD52L2O43399 206 aaKnown RBP12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 CTAG2O75638 210 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 KDM4BO94953 1096 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 OR4A8P0C604 315 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM90A15PP0C7V4 464 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM90A13PP0C7W8 464 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM90A14PP0C7W9 464 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM90A24PP0C7X0 464 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 SERPINF1P36955 418 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 PITPNBP48739 271 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 GPM6AP51674 278 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 MRPS10P82664 201 aaKnown RBP12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 P2RY14Q15391 338 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM209AQ5JX71 171 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 PYHIN1Q6K0P9 492 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 ALKBH2Q6NS38 261 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 CNIH2Q6PI25 160 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 DNM1P46Q6ZS02 220 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 C1QL2Q7Z5L3 287 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 CALHM1Q8IU99 346 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 Q8IYB0 196 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 ZNF611Q8N823 705 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 BORCS5Q969J3 196 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 SPACA5Q96QH8 159 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 S100A13Q99584 98 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 DHRS9Q9BPW9 319 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 PLK3Q9H4B4 646 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 CXorf56Q9H5V9 222 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 DUSP13Q9UII6 198 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 POLDIP2Q9Y2S7 368 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 ATP23Q9Y6H3 246 aa12.12□□□□□ -0.47
SHMT1P1-201ENST00000419974 B9A039 149 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 H3BUI4 141 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 CDC14BO60729 498 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 TMEM225BP0DP42 221 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 HAAOP46952 286 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 RPS27AP62979 156 aaKnown RBP12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 PITPNAQ00169 270 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 ZNF79Q15937 498 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 LRP11Q86VZ4 500 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 OR51T1Q8NGJ9 327 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 LILRB1Q8NHL6 650 aaPredicted RBP12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 NPRL2Q8WTW4 380 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 AQP3Q92482 292 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 URM1Q9BTM9 101 aaKnown RBP12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 SRRQ9GZT4 340 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 LPAR5Q9H1C0 372 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 SEBOXQ9HB31 216 aaPredicted RBP12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 DIABLOQ9NR28 239 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 EXTL2Q9UBQ6 330 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 IL19Q9UHD0 177 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 PRR14LQ5THK1 2151 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 IGKV1-12A0A0C4DH73 117 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 FOXI3A8MTJ6 420 aaPredicted RBP12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM25AB3EWG3 89 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM25CB3EWG5 89 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM25GB3EWG6 89 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 RAB27BO00194 218 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 CYB5AP00167 134 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 IGKV1D-12P01611 117 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 MELTFP08582 738 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 GTF2F2P13984 249 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 ERVK11-1P61568 191 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 ZNF154Q13106 437 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms