RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 CDONQ4KMG0 1287 aa12.65□□□□□ -0.38
NUP50-204ENST00000417702 TP53I3Q53FA7 332 aa12.65□□□□□ -0.38
NUP50-204ENST00000417702 OGFRL1Q5TC84 451 aaPredicted RBP12.65□□□□□ -0.38
NUP50-204ENST00000417702 Q6ZSR3 168 aa12.65□□□□□ -0.38
NUP50-204ENST00000417702 C3orf56Q8N813 242 aa12.65□□□□□ -0.38
NUP50-204ENST00000417702 LY6G5BQ8NDX9 201 aa12.65□□□□□ -0.38
NUP50-204ENST00000417702 LHX4Q969G2 390 aa12.65□□□□□ -0.38
NUP50-204ENST00000417702 GAFA1Q96PS6 74 aa12.65□□□□□ -0.38
NUP50-204ENST00000417702 DCTN5Q9BTE1 182 aa12.65□□□□□ -0.38
NUP50-204ENST00000417702 VCXQ9H320 206 aa12.65□□□□□ -0.38
NUP50-204ENST00000417702 SLC7A11Q9UPY5 501 aa12.65□□□□□ -0.38
NUP50-204ENST00000417702 PCDHGB1Q9Y5G3 927 aa12.65□□□□□ -0.38
NUP50-204ENST00000417702 IGHV1-69DA0A0B4J2H0 117 aa12.64□□□□□ -0.39
NUP50-204ENST00000417702 CENPVL3A0A0U1RRI6 287 aa12.64□□□□□ -0.39
NUP50-204ENST00000417702 DAPL1A0PJW8 107 aa12.64□□□□□ -0.39
NUP50-204ENST00000417702 PQLC2LA1A4F0 135 aa12.64□□□□□ -0.39
NUP50-204ENST00000417702 ANKRD61A6NGH8 418 aa12.64□□□□□ -0.39
NUP50-204ENST00000417702 IGHV1-69P01742 117 aa12.64□□□□□ -0.39
NUP50-204ENST00000417702 RNASE1P07998 156 aaKnown RBP12.64□□□□□ -0.39
NUP50-204ENST00000417702 PSG2P11465 335 aa12.64□□□□□ -0.39
NUP50-204ENST00000417702 CAV3P56539 151 aa12.64□□□□□ -0.39
NUP50-204ENST00000417702 DGUOKQ16854 277 aa12.64□□□□□ -0.39
NUP50-204ENST00000417702 DEFB112Q30KQ8 113 aa12.64□□□□□ -0.39
NUP50-204ENST00000417702 TTC23Q5W5X9 447 aa12.64□□□□□ -0.39
NUP50-204ENST00000417702 RUSC1-AS1Q66K80 236 aa12.64□□□□□ -0.39
NUP50-204ENST00000417702 KCTD20Q7Z5Y7 419 aa12.64□□□□□ -0.39
NUP50-204ENST00000417702 POC1AQ8NBT0 407 aa12.64□□□□□ -0.39
NUP50-204ENST00000417702 C8orf46Q8TAG6 207 aa12.64□□□□□ -0.39
NUP50-204ENST00000417702 MRPL48Q96GC5 212 aaKnown RBP12.64□□□□□ -0.39
NUP50-204ENST00000417702 C1orf147Q96MC9 270 aaPredicted RBP12.64□□□□□ -0.39
NUP50-204ENST00000417702 Q96MT0 163 aa12.64□□□□□ -0.39
NUP50-204ENST00000417702 MYCBPQ99417 103 aaPredicted RBP12.64□□□□□ -0.39
NUP50-204ENST00000417702 NOX4Q9NPH5 578 aa12.64□□□□□ -0.39
NUP50-204ENST00000417702 ACOXLQ9NUZ1 547 aa12.64□□□□□ -0.39
NUP50-204ENST00000417702 IGKV1D-17A0A075B6S4 117 aa12.63□□□□□ -0.39
NUP50-204ENST00000417702 MDFIC2A0A1B0GVS7 189 aa12.63□□□□□ -0.39
NUP50-204ENST00000417702 H3BSH0 61 aa12.63□□□□□ -0.39
NUP50-204ENST00000417702 SYNGR1O43759 233 aa12.63□□□□□ -0.39
NUP50-204ENST00000417702 GATBO75879 557 aaKnown RBP12.63□□□□□ -0.39
NUP50-204ENST00000417702 SERPINA3P01011 423 aa12.63□□□□□ -0.39
NUP50-204ENST00000417702 TFF1P04155 84 aa12.63□□□□□ -0.39
NUP50-204ENST00000417702 UBCP0CG48 685 aaKnown RBP12.63□□□□□ -0.39
NUP50-204ENST00000417702 HKR1P10072 659 aa12.63□□□□□ -0.39
NUP50-204ENST00000417702 CFPP27918 469 aa12.63□□□□□ -0.39
NUP50-204ENST00000417702 CAPZA1P52907 286 aa12.63□□□□□ -0.39
NUP50-204ENST00000417702 ISL1P61371 349 aa12.63□□□□□ -0.39
NUP50-204ENST00000417702 FOXL1Q12952 345 aa12.63□□□□□ -0.39
NUP50-204ENST00000417702 ACP7Q6ZNF0 438 aa12.63□□□□□ -0.39
NUP50-204ENST00000417702 VMO1Q7Z5L0 202 aa12.63□□□□□ -0.39
NUP50-204ENST00000417702 ACBD7Q8N6N7 88 aa12.63□□□□□ -0.39
NUP50-204ENST00000417702 KIR3DL3Q8N743 410 aa12.63□□□□□ -0.39
NUP50-204ENST00000417702 TMEM185AQ8NFB2 350 aa12.63□□□□□ -0.39
NUP50-204ENST00000417702 TRMT10AQ8TBZ6 339 aaKnown RBP12.63□□□□□ -0.39
NUP50-204ENST00000417702 PRDM13Q9H4Q3 707 aa12.63□□□□□ -0.39
NUP50-204ENST00000417702 NKX1-2Q9UD57 310 aaPredicted RBP12.63□□□□□ -0.39
NUP50-204ENST00000417702 LOC107986453A0A1B0GWG9 222 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 FAM230AA0A1W2PPH8 454 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 A0A1W2PQ09 198 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 RFPL4AA6NLU0 287 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 RFPL4AL1F8VTS6 287 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 HOXA3O43365 443 aaPredicted RBP12.62□□□□□ -0.39
NUP50-204ENST00000417702 NOS1APO75052 506 aaPredicted RBP12.62□□□□□ -0.39
NUP50-204ENST00000417702 NXPH2O95156 264 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 PGA5P0DJD9 388 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 AWAT1Q58HT5 328 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 TMEM244Q5VVB8 128 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 ENTHD1Q8IYW4 607 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 PRSS35Q8N3Z0 413 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 DHRSXQ8N5I4 330 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 ZNRF1Q8ND25 227 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 OR2G2Q8NGZ5 317 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 RHOXF1Q8NHV9 184 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 NPRL2Q8WTW4 380 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 CYGBQ8WWM9 190 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 C10orf35Q96D05 121 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 SDSLQ96GA7 329 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 ZNF488Q96MN9 340 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 NRIP2Q9BQI9 281 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 PKIBQ9C010 78 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 AASSQ9UDR5 926 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 ZNF222Q9UK12 451 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 MAB21L2Q9Y586 359 aa12.62□□□□□ -0.39
NUP50-204ENST00000417702 FBN3Q75N90 2809 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 TRBV23-1A0A0A0MS06 115 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 J3QRE1 110 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 SLC1A7O00341 560 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 HTR1AP08908 422 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 GABRB1P18505 474 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 EEF1B2P24534 225 aaKnown RBP12.61□□□□□ -0.39
NUP50-204ENST00000417702 MPZP25189 248 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 KIR3DL2P43630 455 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 FUT6P51993 359 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 OR12D2P58182 307 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 ACTA2P62736 377 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 ACTG2P63267 376 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 GUCA2AQ02747 115 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 BLMHQ13867 455 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 C16orf87Q6PH81 154 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 Q6YL49 198 aa12.61□□□□□ -0.39
NUP50-204ENST00000417702 ANGPTL5Q86XS5 388 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms