RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 VMO1Q7Z5L0 202 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 KCTD20Q7Z5Y7 419 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 CMTM4Q8IZR5 234 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 PQLC1Q8N2U9 271 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 CCDC54Q8NEL0 328 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 C8orf46Q8TAG6 207 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 ZNF488Q96MN9 340 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 SLC29A1Q99808 456 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 AASSQ9UDR5 926 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 ZNF222Q9UK12 451 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 POLDIP2Q9Y2S7 368 aa12.88□□□□□ -0.35
ITGB1-204ENST00000417122 ANK2Q01484 3957 aa12.87□□□□□ -0.35
ITGB1-204ENST00000417122 IGHV1-69DA0A0B4J2H0 117 aa12.87□□□□□ -0.35
ITGB1-204ENST00000417122 J3QRE1 110 aa12.87□□□□□ -0.35
ITGB1-204ENST00000417122 HOXA3O43365 443 aaPredicted RBP12.87□□□□□ -0.35
ITGB1-204ENST00000417122 IGHV1-69P01742 117 aa12.87□□□□□ -0.35
ITGB1-204ENST00000417122 PGA5P0DJD9 388 aa12.87□□□□□ -0.35
ITGB1-204ENST00000417122 CAV3P56539 151 aa12.87□□□□□ -0.35
ITGB1-204ENST00000417122 SMIM21Q3B7S5 101 aa12.87□□□□□ -0.35
ITGB1-204ENST00000417122 AWAT1Q58HT5 328 aa12.87□□□□□ -0.35
ITGB1-204ENST00000417122 KIR3DL3Q8N743 410 aa12.87□□□□□ -0.35
ITGB1-204ENST00000417122 C3orf56Q8N813 242 aa12.87□□□□□ -0.35
ITGB1-204ENST00000417122 ZNRF1Q8ND25 227 aa12.87□□□□□ -0.35
ITGB1-204ENST00000417122 TRMT10AQ8TBZ6 339 aaKnown RBP12.87□□□□□ -0.35
ITGB1-204ENST00000417122 NOX4Q9NPH5 578 aa12.87□□□□□ -0.35
ITGB1-204ENST00000417122 SLC7A11Q9UPY5 501 aa12.87□□□□□ -0.35
ITGB1-204ENST00000417122 EXOGQ9Y2C4 368 aaKnown RBP12.87□□□□□ -0.35
ITGB1-204ENST00000417122 MAB21L2Q9Y586 359 aa12.87□□□□□ -0.35
ITGB1-204ENST00000417122 PCDHGB1Q9Y5G3 927 aa12.87□□□□□ -0.35
ITGB1-204ENST00000417122 FAM230AA0A1W2PPH8 454 aa12.86□□□□□ -0.35
ITGB1-204ENST00000417122 NOS1APO75052 506 aaPredicted RBP12.86□□□□□ -0.35
ITGB1-204ENST00000417122 UBCP0CG48 685 aaKnown RBP12.86□□□□□ -0.35
ITGB1-204ENST00000417122 GABRB1P18505 474 aa12.86□□□□□ -0.35
ITGB1-204ENST00000417122 KIR3DL2P43630 455 aa12.86□□□□□ -0.35
ITGB1-204ENST00000417122 OR12D2P58182 307 aa12.86□□□□□ -0.35
ITGB1-204ENST00000417122 FOXL1Q12952 345 aa12.86□□□□□ -0.35
ITGB1-204ENST00000417122 UBE2V2Q15819 145 aa12.86□□□□□ -0.35
ITGB1-204ENST00000417122 Q6YL49 198 aa12.86□□□□□ -0.35
ITGB1-204ENST00000417122 ANGPTL5Q86XS5 388 aa12.86□□□□□ -0.35
ITGB1-204ENST00000417122 CALHM1Q8IU99 346 aa12.86□□□□□ -0.35
ITGB1-204ENST00000417122 PDZD9Q8IXQ8 264 aa12.86□□□□□ -0.35
ITGB1-204ENST00000417122 ENTHD1Q8IYW4 607 aa12.86□□□□□ -0.35
ITGB1-204ENST00000417122 RDH10Q8IZV5 341 aa12.86□□□□□ -0.35
ITGB1-204ENST00000417122 TMEM185AQ8NFB2 350 aa12.86□□□□□ -0.35
ITGB1-204ENST00000417122 OR2G2Q8NGZ5 317 aa12.86□□□□□ -0.35
ITGB1-204ENST00000417122 RNF166Q96A37 237 aaPredicted RBP12.86□□□□□ -0.35
ITGB1-204ENST00000417122 SDSLQ96GA7 329 aa12.86□□□□□ -0.35
ITGB1-204ENST00000417122 SIRT7Q9NRC8 400 aa12.86□□□□□ -0.35
ITGB1-204ENST00000417122 LOC100130705A0A1B0GUX0 176 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 LOC107986453A0A1B0GWG9 222 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 RFPL4AA6NLU0 287 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 RFPL4AL1F8VTS6 287 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 SLC16A6O15403 523 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 MPZL2O60487 215 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 GATBO75879 557 aaKnown RBP12.85□□□□□ -0.35
ITGB1-204ENST00000417122 NXPH2O95156 264 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 BAG2O95816 211 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 SERPINA3P01011 423 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 MPZP25189 248 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 CAPZA1P52907 286 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 ZNF91Q05481 1191 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 TMEM244Q5VVB8 128 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 C16orf87Q6PH81 154 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 METAP1DQ6UB28 335 aaPredicted RBP12.85□□□□□ -0.35
ITGB1-204ENST00000417122 BATF2Q8N1L9 274 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 ACBD7Q8N6N7 88 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 Q8N7P7 452 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 RHOXF1Q8NHV9 184 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 NPRL2Q8WTW4 380 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 C10orf35Q96D05 121 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 LGALS12Q96DT0 336 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 Q96MT0 163 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 NRIP2Q9BQI9 281 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 PKIBQ9C010 78 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 CHST5Q9GZS9 411 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 ELL3Q9HB65 397 aaPredicted RBP12.85□□□□□ -0.35
ITGB1-204ENST00000417122 FRRS1LQ9P0K9 344 aa12.85□□□□□ -0.35
ITGB1-204ENST00000417122 A0A1W2PQ09 198 aa12.84□□□□□ -0.35
ITGB1-204ENST00000417122 J3QLW9 94 aa12.84□□□□□ -0.35
ITGB1-204ENST00000417122 HTR1AP08908 422 aa12.84□□□□□ -0.35
ITGB1-204ENST00000417122 DBTP11182 482 aaKnown RBP12.84□□□□□ -0.35
ITGB1-204ENST00000417122 ZNF19P17023 458 aa12.84□□□□□ -0.35
ITGB1-204ENST00000417122 PRDX2P32119 198 aa12.84□□□□□ -0.35
ITGB1-204ENST00000417122 FUT6P51993 359 aa12.84□□□□□ -0.35
ITGB1-204ENST00000417122 NANOS3P60323 173 aaKnown RBP12.84□□□□□ -0.35
ITGB1-204ENST00000417122 IL24Q13007 206 aa12.84□□□□□ -0.35
ITGB1-204ENST00000417122 FDX2Q6P4F2 183 aa12.84□□□□□ -0.35
ITGB1-204ENST00000417122 ZNF561Q8N587 486 aa12.84□□□□□ -0.35
ITGB1-204ENST00000417122 CD177Q8N6Q3 437 aa12.84□□□□□ -0.35
ITGB1-204ENST00000417122 PP6455Q8WZ26 134 aa12.84□□□□□ -0.35
ITGB1-204ENST00000417122 HES4Q9HCC6 221 aa12.84□□□□□ -0.35
ITGB1-204ENST00000417122 TNFRSF19Q9NS68 423 aa12.84□□□□□ -0.35
ITGB1-204ENST00000417122 FAM118AQ9NWS6 357 aa12.84□□□□□ -0.35
ITGB1-204ENST00000417122 TRBV23-1A0A0A0MS06 115 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 A0A0U1RQK1 487 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 M0R1W7 72 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 SLC1A7O00341 560 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 ISG15P05161 165 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 MELTFP08582 738 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 CEBPDP49716 269 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms