RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 MRPS28Q9Y2Q9 187 aaKnown RBP6.89□□□□□ -1.31
AP001042.1-201ENST00000416842 ATRQ13535 2644 aa6.89□□□□□ -1.31
AP001042.1-201ENST00000416842 HRNRQ86YZ3 2850 aaPredicted RBP6.89□□□□□ -1.31
AP001042.1-201ENST00000416842 IGLV3-9A0A075B6K5 115 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 A0A0A6YYD4 124 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 IGKV1-12A0A0C4DH73 117 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 DPRXA6NFQ7 191 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 GGT3PA6NGU5 568 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 ZNF850A8MQ14 1090 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 FAM25AB3EWG3 89 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 FAM25CB3EWG5 89 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 FAM25GB3EWG6 89 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 MAGEB3O15480 346 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 AKR7A2O43488 359 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 LANCL1O43813 399 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 PTBP3O95758 552 aaKnown RBP6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 IGKV1D-12P01611 117 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 IGHV3-13P01766 116 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 HEXAP06865 529 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 CHRM2P08172 466 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 IL7P13232 177 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 SELEP16581 610 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 DNASE1P24855 282 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 MPZP25189 248 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 CD40P25942 277 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 GLRXP35754 106 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 MPV17P39210 176 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 OR3A4PP47883 348 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 ASCL1P50553 236 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 MTCP1P56278 107 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 TMEM50BP56557 158 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 PRSS12P56730 875 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 ERVS71-1P61550 626 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 PRDX4Q13162 271 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 ASAH1Q13510 395 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 DAZAP2Q15038 168 aaPredicted RBP6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 CNN3Q15417 329 aaKnown RBP6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 HACD4Q5VWC8 232 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 ELP2Q6IA86 826 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 OR2T2Q6IF00 324 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 RAB12Q6IQ22 244 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 C16orf87Q6PH81 154 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 GLIPR1L1Q6UWM5 242 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 UNQ6126/PRO20091Q6UXV3 157 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 MOB3CQ70IA8 216 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 MRPL21Q7Z2W9 205 aaKnown RBP6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 SNX29P2Q8IUI4 249 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 Q8N402 240 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 JAGN1Q8N5M9 183 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 TMEM104Q8NE00 496 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 NUP37Q8NFH4 326 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 C15orf40Q8WUR7 153 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 TMEM171Q8WVE6 324 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 PIGCQ92535 297 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 RNASE6Q93091 150 aaKnown RBP6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 WFIKKN1Q96NZ8 548 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 SPACA5Q96QH8 159 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 NKX3-1Q99801 234 aaPredicted RBP6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 LPAR5Q9H1C0 372 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 OR51I2Q9H344 312 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 NEK6Q9HC98 313 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 PURGQ9UJV8 347 aaKnown RBP6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 SLC7A11Q9UPY5 501 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 NBEAL1Q6ZS30 2694 aa6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 CHD3Q12873 2000 aaKnown RBP6.88□□□□□ -1.31
AP001042.1-201ENST00000416842 PLCE1Q9P212 2302 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 A0A1W2PQ09 198 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 EEF1E1-BLOC1S5C9J1V9 151 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 SULT1C2O00338 296 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 EEF1E1O43324 174 aaKnown RBP6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 CDC14BO60729 498 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 CA11O75493 328 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 PTAFRP25105 342 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 LOXP28300 417 aaPredicted RBP6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 TALDO1P37837 337 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 ZNF83P51522 516 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 ATP1B3P54709 279 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 TAS2R20P59543 309 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 RPS27AP62979 156 aaKnown RBP6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 MRPS10P82664 201 aaKnown RBP6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 PITPNAQ00169 270 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 SORDQ00796 357 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 ZNF718Q3SXZ3 478 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 ZNF260Q3ZCT1 412 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 PYDC2Q56P42 97 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 DMRTC1Q5HYR2 192 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 NHLRC3Q5JS37 347 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 OR10K2Q6IF99 312 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 Q6ZR03 302 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 DCDC5Q6ZRR9 648 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 GDPD3Q7L5L3 318 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 C11orf53Q8IXP5 236 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 ZDHHC23Q8IYP9 409 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 MINDY2Q8NBR6 621 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 OR8G5Q8NG78 346 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 OR1J1Q8NGS3 322 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 GPX8Q8TED1 209 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 SMIM4Q8WVI0 70 aa6.87□□□□□ -1.31
AP001042.1-201ENST00000416842 AQP3Q92482 292 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms