RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 CARHSP1Q9Y2V2 147 aaKnown RBP12.85□□□□□ -0.35
LINC00475-202ENST00000416438 PRELID3BQ9Y3B1 194 aa12.85□□□□□ -0.35
LINC00475-202ENST00000416438 PCDHGA1Q9Y5H4 931 aa12.85□□□□□ -0.35
LINC00475-202ENST00000416438 A0A0J9YW62 118 aa12.85□□□□□ -0.35
LINC00475-202ENST00000416438 C9JQL5 133 aa12.85□□□□□ -0.35
LINC00475-202ENST00000416438 PI4KAP42356 2102 aa12.85□□□□□ -0.35
LINC00475-202ENST00000416438 HGFACQ04756 655 aa12.85□□□□□ -0.35
LINC00475-202ENST00000416438 TOMM40LQ969M1 308 aa12.85□□□□□ -0.35
LINC00475-202ENST00000416438 C1orf123Q9NWV4 160 aa12.85□□□□□ -0.35
LINC00475-202ENST00000416438 FRYLO94915 3013 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 IGKV1-27A0A075B6S5 117 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 MTRF1O75570 445 aaKnown RBP12.84□□□□□ -0.35
LINC00475-202ENST00000416438 H2AFB1P0C5Y9 115 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 RPL12P30050 165 aaKnown RBP12.84□□□□□ -0.35
LINC00475-202ENST00000416438 NTF4P34130 210 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 TSPO2Q5TGU0 170 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 GGNBP1Q5YKI7 109 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 LINC00518Q8N0U6 118 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 BSCL2Q96G97 398 aaPredicted RBP12.84□□□□□ -0.35
LINC00475-202ENST00000416438 SMIM8Q96KF7 97 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 Q96M66 194 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 NRIP2Q9BQI9 281 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 SRXN1Q9BYN0 137 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 DNAJB11Q9UBS4 358 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 NDRG3Q9UGV2 375 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 AK3Q9UIJ7 227 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 K7EPK0 472 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 PET100P0DJ07 73 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 OR5H8P0DN80 308 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 OTX1P32242 354 aaPredicted RBP12.84□□□□□ -0.35
LINC00475-202ENST00000416438 RPL35P42766 123 aaKnown RBP12.84□□□□□ -0.35
LINC00475-202ENST00000416438 AKIRIN2Q53H80 203 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 ZNF468Q5VIY5 522 aaPredicted RBP12.84□□□□□ -0.35
LINC00475-202ENST00000416438 DHRS7BQ6IAN0 325 aaPredicted RBP12.84□□□□□ -0.35
LINC00475-202ENST00000416438 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.84□□□□□ -0.35
LINC00475-202ENST00000416438 SGPP2Q8IWX5 399 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 SPAG16Q8N0X2 631 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 BATF2Q8N1L9 274 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 FAM71E2Q8N5Q1 922 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 FBXL17Q9UF56 701 aa12.84□□□□□ -0.35
LINC00475-202ENST00000416438 PTRH2Q9Y3E5 179 aaKnown RBP12.84□□□□□ -0.35
LINC00475-202ENST00000416438 UMODP07911 640 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 LIFP15018 202 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 FCGR2CP31995 323 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 AKR1D1P51857 326 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 FXYD4P59646 89 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 ZNF774Q6NX45 483 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 IL34Q6ZMJ4 242 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 FNDC9Q8TBE3 224 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 SEC11CQ9BY50 192 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 RCC2Q9P258 522 aaKnown RBP12.83□□□□□ -0.36
LINC00475-202ENST00000416438 ANXA10Q9UJ72 324 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 DKKL1Q9UK85 242 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 PADI1Q9ULC6 663 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 MEMO1Q9Y316 297 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 IGHV1-45A0A0A0MS14 117 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 ZNF850A8MQ14 1090 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 RNASEK-C17orf49H0YIS7 233 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 SNAPINO95295 136 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 CD80P33681 288 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 CAV2P51636 162 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 PIGPP57054 158 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 TMEM33P57088 247 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 HIST1H3AP68431 136 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 SURF2Q15527 256 aaPredicted RBP12.83□□□□□ -0.36
LINC00475-202ENST00000416438 HIST2H3PS2Q5TEC6 136 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 ETV3LQ6ZN32 361 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 HIST2H3AQ71DI3 136 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 MAML2Q8IZL2 1156 aaPredicted RBP12.83□□□□□ -0.36
LINC00475-202ENST00000416438 SAP25Q8TEE9 199 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 MR1Q95460 341 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 ERGIC1Q969X5 290 aa12.83□□□□□ -0.36
LINC00475-202ENST00000416438 MARS2Q96GW9 593 aaKnown RBP12.83□□□□□ -0.36
LINC00475-202ENST00000416438 FOXD3Q9UJU5 478 aaPredicted RBP12.83□□□□□ -0.36
LINC00475-202ENST00000416438 NXT1Q9UKK6 140 aaKnown RBP12.83□□□□□ -0.36
LINC00475-202ENST00000416438 ONECUT2O95948 504 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 ZNF84P51523 738 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 RSU1Q15404 277 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 PIGYQ3MUY2 71 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 ZFP82Q8N141 532 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 AKR7LQ8NHP1 331 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 SPTSSAQ969W0 71 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 REEP6Q96HR9 211 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 SULT4A1Q9BR01 284 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 DUSP23Q9BVJ7 150 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 TNRC18O15417 2968 aaPredicted RBP12.82□□□□□ -0.36
LINC00475-202ENST00000416438 CRYM-AS1A6NIL9 109 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 DEDDO75618 318 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 CTSDP07339 412 aaPredicted RBP12.82□□□□□ -0.36
LINC00475-202ENST00000416438 SFTA3P0C7M3 94 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 CCL4P13236 92 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 LYSMD4Q5XG99 296 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 FOXL2NBQ6ZUU3 175 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 TMEM156Q8N614 296 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 C2CD4CQ8TF44 421 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 SAT2Q96F10 170 aaPredicted RBP12.82□□□□□ -0.36
LINC00475-202ENST00000416438 PRRX2Q99811 253 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 CMSS1Q9BQ75 279 aaKnown RBP12.82□□□□□ -0.36
LINC00475-202ENST00000416438 ANGPTL4Q9BY76 406 aa12.82□□□□□ -0.36
LINC00475-202ENST00000416438 METTL9Q9H1A3 318 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms