RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 F5H5K5 113 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 OR2F2O95006 317 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 DUS4LO95620 317 aaKnown RBP12.89□□□□□ -0.35
USP4-203ENST00000415188 CSN2P05814 226 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 CRYGSP22914 178 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 CARD18P57730 90 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 TAS2R46P59540 309 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 PMP22Q01453 160 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 OC90Q02509 493 aaPredicted RBP12.89□□□□□ -0.35
USP4-203ENST00000415188 PPP1R1AQ13522 171 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 OR2F1Q13607 317 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 GFOD2Q3B7J2 385 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 PLAC9Q5JTB6 97 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 ACER2Q5QJU3 275 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 ZNF468Q5VIY5 522 aaPredicted RBP12.89□□□□□ -0.35
USP4-203ENST00000415188 OR52W1Q6IF63 320 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 GGNQ86UU5 652 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 TMEM17Q86X19 198 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 TERB2Q8NHR7 220 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 FBXW5Q969U6 566 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 MRGPRFQ96AM1 343 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 SPSB1Q96BD6 273 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 ADGRG7Q96K78 797 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 SPACA5Q96QH8 159 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 TMEM38BQ9NVV0 291 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 PLEK2Q9NYT0 353 aa12.89□□□□□ -0.35
USP4-203ENST00000415188 A0A1B0GW55 424 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 hCG_1807616A0A1W2PRN6 198 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 OR5H14A6NHG9 310 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 LRRC3CA6NJW4 275 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 OR2AT4A6NND4 320 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 SOCS1O15524 211 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 SGCEO43556 437 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 WISP2O76076 250 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 DUX4L2P0CJ85 424 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 DUX4L3P0CJ86 424 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 DUX4L4P0CJ87 422 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 DUX4L5P0CJ88 424 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 DUX4L6P0CJ89 424 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 DUX4L7P0CJ90 424 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 MGMTP16455 207 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 CPT2P23786 658 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 TMEM50BP56557 158 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 PCBD1P61457 104 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 AANATQ16613 207 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 RSPO1Q2MKA7 263 aaPredicted RBP12.88□□□□□ -0.35
USP4-203ENST00000415188 KRTAP27-1Q3LI81 207 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 LRRC18Q8N456 261 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 TMEM185AQ8NFB2 350 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 OR51T1Q8NGJ9 327 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 OR5H2Q8NGV7 314 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 OR1F12Q8NHA8 337 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 S100A13Q99584 98 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 HES7Q9BYE0 225 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 RGCCQ9H4X1 137 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 BANF2Q9H503 90 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 DUX4Q9UBX2 424 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 PIGLQ9Y2B2 252 aa12.88□□□□□ -0.35
USP4-203ENST00000415188 ZNF716A6NP11 495 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 E9PLN8 166 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 SYNGR3O43761 229 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 ZG16O60844 167 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 CNR1P21554 472 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 PRKACBP22694 351 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 FPR2P25090 351 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 MPGP29372 298 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 ECI1P42126 302 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 CYB561P49447 251 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 IL13RA1P78552 427 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 CNN3Q15417 329 aaKnown RBP12.87□□□□□ -0.35
USP4-203ENST00000415188 STK11Q15831 433 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 MICBQ29980 383 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 NRN1LQ496H8 165 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 SLC22A6Q4U2R8 563 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 C11orf87Q6NUJ2 197 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 GFRALQ6UXV0 394 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 AAED1Q7RTV5 226 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 YRDCQ86U90 279 aaKnown RBP12.87□□□□□ -0.35
USP4-203ENST00000415188 ZNF546Q86UE3 836 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 SULF2Q8IWU5 870 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 KCNRGQ8N5I3 272 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 SEMA6DQ8NFY4 1073 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 ST8SIA4Q92187 359 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 TMEM45BQ96B21 275 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 FBXO17Q96EF6 278 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 ARHGAP5-AS1Q96IT6 56 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 SIGLEC12Q96PQ1 595 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 PDCD10Q9BUL8 212 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 ABI3Q9P2A4 366 aa12.87□□□□□ -0.35
USP4-203ENST00000415188 BOKQ9UMX3 212 aaPredicted RBP12.87□□□□□ -0.35
USP4-203ENST00000415188 A0A0G2JMM0 328 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 A0A1W2PPB8 328 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 A0A1W2PRS3 328 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 OR6C6A6NF89 314 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 KIR3DP1A8MWS1 328 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 I3L521 148 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 CRYZL1O95825 349 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 PMP2P02689 132 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 FAHP16930 419 aa12.86□□□□□ -0.35
USP4-203ENST00000415188 AMY2BP19961 511 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms