RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 DKK1O94907 266 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 SFTPBP07988 381 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 FOLR2P14207 255 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 PNLIPP16233 465 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 ZNF708P17019 499 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 OTX1P32242 354 aaPredicted RBP8.57□□□□□ -1.04
CD44-206ENST00000415148 FHITP49789 147 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 DVL1P1P54792 670 aaPredicted RBP8.57□□□□□ -1.04
CD44-206ENST00000415148 H3F3AP84243 136 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 UBE2V2Q15819 145 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 IAH1Q2TAA2 248 aaPredicted RBP8.57□□□□□ -1.04
CD44-206ENST00000415148 FAM76BQ5HYJ3 339 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 SULF2Q8IWU5 870 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 SLC38A9Q8NBW4 561 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 OR10G3Q8NGC4 313 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 INTS12Q96CB8 462 aaKnown RBP8.57□□□□□ -1.04
CD44-206ENST00000415148 SHDQ96IW2 340 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 C19orf25Q9UFG5 118 aaPredicted RBP8.57□□□□□ -1.04
CD44-206ENST00000415148 NCOA6Q14686 2063 aaPredicted RBP8.57□□□□□ -1.04
CD44-206ENST00000415148 hCG_1809904A0A1W2PP81 198 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 A0A1W2PR64 198 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 A0A1W2PRV1 198 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 C5orf52A6NGY3 159 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 CRYM-AS1A6NIL9 109 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 DHRS7CA6NNS2 312 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 K7EPK0 472 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 MSTNO14793 375 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 OR2J2O76002 312 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 VAMP5O95183 116 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 IFNA4P05014 189 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 FCGR2AP12318 317 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 KLK2P20151 261 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 PTGER4P35408 488 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 CLDN17P56750 224 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 TMEM176BQ3YBM2 270 aaPredicted RBP8.57□□□□□ -1.04
CD44-206ENST00000415148 FAM71E2Q8N5Q1 922 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 UBAC2Q8NBM4 344 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 SEMA6DQ8NFY4 1073 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 FNDC9Q8TBE3 224 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 NPRL2Q8WTW4 380 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 DNASE2BQ8WZ79 361 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 ERGIC1Q969X5 290 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 SPACA9Q96E40 222 aaPredicted RBP8.57□□□□□ -1.04
CD44-206ENST00000415148 RNF122Q9H9V4 155 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 HSF4Q9ULV5 492 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 AMDHD2Q9Y303 409 aa8.57□□□□□ -1.04
CD44-206ENST00000415148 CEP290O15078 2479 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 A0A1W2PPH5 198 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 TP53I11O14683 189 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 EIF1BO60739 113 aaKnown RBP8.56□□□□□ -1.04
CD44-206ENST00000415148 KNG1P01042 644 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 FABP1P07148 127 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 SERPINA2P20848 420 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 CSNK1A1P48729 337 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 POLR2GP62487 172 aaKnown RBP eCLIP8.56□□□□□ -1.04
CD44-206ENST00000415148 S100A12P80511 92 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 Q6ZRG5 221 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 WDSUB1Q8N9V3 476 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 EDARADDQ8WWZ3 215 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 LIN37Q96GY3 246 aaPredicted RBP8.56□□□□□ -1.04
CD44-206ENST00000415148 KIRREL1Q96J84 757 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 PRRX2Q99811 253 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 SULT4A1Q9BR01 284 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 ZNF2Q9BSG1 426 aaPredicted RBP8.56□□□□□ -1.04
CD44-206ENST00000415148 SCRT1Q9BWW7 348 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 EGLN1Q9GZT9 426 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 ARV1Q9H2C2 271 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 SMCO4Q9NRQ5 59 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 PLEKHJ1Q9NW61 149 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 ZNF581Q9P0T4 197 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 ZMAT5Q9UDW3 170 aaKnown RBP8.56□□□□□ -1.04
CD44-206ENST00000415148 KCNIP3Q9Y2W7 256 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 RFNGQ9Y644 331 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 KPTNQ9Y664 436 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 CCDC85CA6NKD9 419 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 RAMP1O60894 148 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 SCRG1O75711 98 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 C1QL1O75973 258 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 SNRNP70P08621 437 aaKnown RBP8.56□□□□□ -1.04
CD44-206ENST00000415148 PTAFRP25105 342 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 FCGR2CP31995 323 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 AFF3P51826 1226 aaKnown RBP8.56□□□□□ -1.04
CD44-206ENST00000415148 ENDOGQ14249 297 aaKnown RBP8.56□□□□□ -1.04
CD44-206ENST00000415148 ZNF385CQ66K41 422 aaPredicted RBP8.56□□□□□ -1.04
CD44-206ENST00000415148 RPUSD3Q6P087 351 aaKnown RBP8.56□□□□□ -1.04
CD44-206ENST00000415148 ZNF574Q6ZN55 896 aaPredicted RBP8.56□□□□□ -1.04
CD44-206ENST00000415148 C15orf54Q8N8G6 183 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 SPSB1Q96BD6 273 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 Q96M66 194 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 OR6C1Q96RD1 312 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 RASL10BQ96S79 203 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 PIGQQ9BRB3 760 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 HDHD3Q9BSH5 251 aaPredicted RBP8.56□□□□□ -1.04
CD44-206ENST00000415148 RPS10P5Q9NQ39 176 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 FBXL17Q9UF56 701 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 ANXA10Q9UJ72 324 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 UNC13CQ8NB66 2214 aa8.56□□□□□ -1.04
CD44-206ENST00000415148 BRWD1Q9NSI6 2320 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 A0A1B0GV50 99 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 MASP2O00187 686 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms