RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 C9orf139Q6ZV77 190 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 LHFPL3Q86UP9 236 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 PRSS35Q8N3Z0 413 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 ZDHHC22Q8N966 263 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 POC1AQ8NBT0 407 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 OR2G2Q8NGZ5 317 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 RHOXF1Q8NHV9 184 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 TRMT10AQ8TBZ6 339 aaKnown RBP9.27□□□□□ -0.93
RFFL-204ENST00000414419 GATAD2BQ8WXI9 593 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 C10orf35Q96D05 121 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 LGALS12Q96DT0 336 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 DMRTB1Q96MA1 342 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 RDH12Q96NR8 316 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 GAFA1Q96PS6 74 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 ZMAT3Q9HA38 289 aaKnown RBP9.27□□□□□ -0.93
RFFL-204ENST00000414419 AMBNQ9NP70 447 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 RPL36Q9Y3U8 105 aaKnown RBP9.27□□□□□ -0.93
RFFL-204ENST00000414419 KPTNQ9Y664 436 aa9.27□□□□□ -0.93
RFFL-204ENST00000414419 A0A1W2PQ09 198 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 J3QRE1 110 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 SIGLEC5O15389 551 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 SYNGR1O43759 233 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 FCN3O75636 299 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 PSG2P11465 335 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 ZNF20P17024 532 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 GABRB1P18505 474 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 AMY2BP19961 511 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 PRTN3P24158 256 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 FUT6P51993 359 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 RAB40BQ12829 278 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 BLMHQ13867 455 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 GALEQ14376 348 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 DGUOKQ16854 277 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 LRRC36Q1X8D7 754 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 RDH10Q8IZV5 341 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 FGFRL1Q8N441 504 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 TMEM185AQ8NFB2 350 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 NPRL2Q8WTW4 380 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 PP6455Q8WZ26 134 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 LHX4Q969G2 390 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 SLC25A28Q96A46 364 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 BORCS8Q96FH0 119 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 C4orf36Q96KX1 117 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 DUX5Q96PT3 197 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 TBX15Q96SF7 602 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 DCTN5Q9BTE1 182 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 ALG8Q9BVK2 526 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 PKIBQ9C010 78 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 CHST5Q9GZS9 411 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 SIRPDQ9H106 197 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 ESM1Q9NQ30 184 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 C8orf4Q9NR00 106 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 INPP5EQ9NRR6 644 aa9.26□□□□□ -0.93
RFFL-204ENST00000414419 IGKV1D-17A0A075B6S4 117 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 CENPVL3A0A0U1RRI6 287 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 DNAJC9-AS1A6NH13 148 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 RFPL4AA6NLU0 287 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 RFPL4AL1F8VTS6 287 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 SLC1A7O00341 560 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 NOS1APO75052 506 aaPredicted RBP9.25□□□□□ -0.93
RFFL-204ENST00000414419 CYB5AP00167 134 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 TFF1P04155 84 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 ISG15P05161 165 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 RPSAP08865 295 aaKnown RBP9.25□□□□□ -0.93
RFFL-204ENST00000414419 PGA5P0DJD9 388 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 SELLP14151 372 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 MMP9P14780 707 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 KIR3DL2P43630 455 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 CCR9P51686 369 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 ATP1B3P54709 279 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 CAV3P56539 151 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 IL24Q13007 206 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 UBE2V2Q15819 145 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 FDX2Q6P4F2 183 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 VMO1Q7Z5L0 202 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 ANGPTL5Q86XS5 388 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 CALHM1Q8IU99 346 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 EGFL6Q8IUX8 553 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 KIR3DL3Q8N743 410 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 ZNF676Q8N7Q3 588 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 ZNRF1Q8ND25 227 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 LY6G5BQ8NDX9 201 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 CYGBQ8WWM9 190 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 PELI1Q96FA3 418 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 SDSLQ96GA7 329 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 ZNF488Q96MN9 340 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 ZNF48Q96MX3 618 aaPredicted RBP9.25□□□□□ -0.93
RFFL-204ENST00000414419 FRRS1LQ9P0K9 344 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 OR14J1Q9UGF5 321 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 HHLA2Q9UM44 414 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 MYRFQ9Y2G1 1151 aa9.25□□□□□ -0.93
RFFL-204ENST00000414419 IGHV1-69DA0A0B4J2H0 117 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 A0A1W2PPH5 198 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 TMEM89A2RUT3 159 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 INMTO95050 263 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 IGHV1-69P01742 117 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 PRKACBP22694 351 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 EEF1B2P24534 225 aaKnown RBP9.24□□□□□ -0.93
RFFL-204ENST00000414419 MPZP25189 248 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 PRDX2P32119 198 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms