RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 SLC31A2O15432 143 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 MED6O75586 246 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 SLC2A10O95528 541 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 IFNA5P01569 189 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 HOXB5P09067 269 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 SLC25A4P12235 298 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 RNH1P13489 461 aaKnown RBP8.25□□□□□ -1.09
SNHG3-201ENST00000413987 LAP3P28838 519 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 PTH2RP49190 550 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 ASCL1P50553 236 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 P2RX1P51575 399 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 HCCSP53701 268 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 CCL7P80098 99 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 ARL6IP1Q15041 203 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 EIF2S3LQ2VIR3 472 aaKnown RBP8.25□□□□□ -1.09
SNHG3-201ENST00000413987 RPL13AP3Q6NVV1 102 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 OR2W3Q7Z3T1 314 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 RNF144BQ7Z419 303 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 MYPOPQ86VE0 399 aaPredicted RBP8.25□□□□□ -1.09
SNHG3-201ENST00000413987 CBLN2Q8IUK8 224 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 CSNK1A1LQ8N752 337 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 ACOT4Q8N9L9 421 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 PRSS33Q8NF86 280 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 OR1J4Q8NGS1 313 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 DOK4Q8TEW6 326 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 TMEM239Q8WW34 195 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 RERGQ96A58 199 aaPredicted RBP8.25□□□□□ -1.09
SNHG3-201ENST00000413987 TM4SF18Q96CE8 201 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 SMIM19Q96E16 107 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 ZNF285Q96NJ3 590 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 MS4A4EQ96PG1 132 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 SEC11CQ9BY50 192 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 TMEM138Q9NPI0 162 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 CALML5Q9NZT1 146 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 ST6GALNAC2Q9UJ37 374 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 AK6Q9Y3D8 172 aaKnown RBP8.25□□□□□ -1.09
SNHG3-201ENST00000413987 A0A0A6YYD5 115 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 PRSS37A4D1T9 235 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 CDHR4A6H8M9 788 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 FAM183AA6NL82 134 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 E9PLN8 166 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 OR2J3O76001 311 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 SLC35G6P0C7Q6 338 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 HIST1H1TP22492 207 aaPredicted RBP8.25□□□□□ -1.09
SNHG3-201ENST00000413987 PAX6P26367 422 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 PYCR1P32322 319 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 COMPP49747 757 aaPredicted RBP8.25□□□□□ -1.09
SNHG3-201ENST00000413987 MELKQ14680 651 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 CDNFQ49AH0 187 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 FAM74A1Q5RGS3 127 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 LPCAT3Q6P1A2 487 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 UNQ9370/PRO34162Q6UXP9 181 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 OR7G2Q8NG99 324 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 OR6N1Q8NGY5 312 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 RXFP4Q8TDU9 374 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 ARL11Q969Q4 196 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 VKORC1Q9BQB6 163 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 MAP1LC3CQ9BXW4 147 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 ULBP2Q9BZM5 246 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 RNF122Q9H9V4 155 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 SEBOXQ9HB31 216 aaPredicted RBP8.25□□□□□ -1.09
SNHG3-201ENST00000413987 NECAP2Q9NVZ3 263 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 NXT1Q9UKK6 140 aaKnown RBP8.25□□□□□ -1.09
SNHG3-201ENST00000413987 RNF115Q9Y4L5 304 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 ETV7Q9Y603 341 aa8.25□□□□□ -1.09
SNHG3-201ENST00000413987 LOC105371242A0A075B767 164 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 A0A1W2PNV4 684 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 TLCD2A6NGC4 264 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 UNC119BA6NIH7 251 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 CPSF4LA6NMK7 179 aaKnown RBP8.24□□□□□ -1.09
SNHG3-201ENST00000413987 IFITM5A6NNB3 132 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 C1orf196B1AJZ1 125 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 CD8AP01732 235 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 CRHP06850 196 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 DANCRP0C864 163 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 FOLR1P15328 257 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 CD82P27701 267 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 CLDN18P56856 261 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 OR12D2P58182 307 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 CXADRP78310 365 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 OC90Q02509 493 aaPredicted RBP8.24□□□□□ -1.09
SNHG3-201ENST00000413987 ZNF85Q03923 595 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 TNFRSF9Q07011 255 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 TNXAQ16473 311 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 FAM69BQ5VUD6 431 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 GLT8D1Q68CQ7 371 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 RPL22L1Q6P5R6 122 aaKnown RBP8.24□□□□□ -1.09
SNHG3-201ENST00000413987 DNM1P46Q6ZS02 220 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 SLC16A13Q7RTY0 426 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 NRMQ8IXM6 262 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 SYS1Q8N2H4 156 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 MUC20Q8N307 709 aaPredicted RBP8.24□□□□□ -1.09
SNHG3-201ENST00000413987 LRRC75AQ8NAA5 344 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 OR9A4Q8NGU2 314 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 RNASE11Q8TAA1 199 aaKnown RBP8.24□□□□□ -1.09
SNHG3-201ENST00000413987 EXOSC8Q96B26 276 aaKnown RBP8.24□□□□□ -1.09
SNHG3-201ENST00000413987 SLC25A38Q96DW6 304 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 DUSP23Q9BVJ7 150 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 SIRT7Q9NRC8 400 aa8.24□□□□□ -1.09
SNHG3-201ENST00000413987 C14orf105Q9NVL8 296 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms