RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 YTHDF2Q9Y5A9 579 aaKnown RBP2.16□□□□□ -2.06
HMGB1P11-201ENST00000413899 DNAJC15Q9Y5T4 150 aa2.16□□□□□ -2.06
HMGB1P11-201ENST00000413899 KMT2EQ8IZD2 1858 aa2.16□□□□□ -2.06
HMGB1P11-201ENST00000413899 PRRC2BQ5JSZ5 2229 aaKnown RBP2.15□□□□□ -2.06
HMGB1P11-201ENST00000413899 C1orf232A0A0U1RR37 186 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 TCRBV3S1A0A5B6 114 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 PRORSD1PA6NEY8 169 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 SUPT3HB4E1H0 165 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 SPECC1L-ADORA2AF8WAN1 911 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 INS-IGF2F8WCM5 200 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 NME4O00746 187 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 GOSR2O14653 212 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 PRMT5O14744 637 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 LSM1O15116 133 aaKnown RBP2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 CCDC22O60826 627 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 ATP5HO75947 161 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 MRPL3P09001 348 aaKnown RBP2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 RBP1P09455 135 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 HOXB8P17481 243 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 AK4P27144 223 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 CCR7P32248 378 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 IFNA8P32881 189 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 SPAM1P38567 509 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 SPINT3P49223 89 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 CYB561P49447 251 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 TTPAP49638 278 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 PRLHRP49683 370 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 NUDT2P50583 147 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 RPL14P50914 215 aaKnown RBP2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 RORCP51449 518 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 KRTAP10-10P60014 251 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 PLP1P60201 277 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 ATP6V0D1P61421 351 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 KDSRQ06136 332 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 TGFBIQ15582 683 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 POU2AF1Q16633 256 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 TRMT5Q32P41 509 aaKnown RBP2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 CCSMST1Q4G0I0 132 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 DNAL1Q4LDG9 190 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 LY6G6FQ5SQ64 297 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 PIP5KL1Q5T9C9 394 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 METTL21CQ5VZV1 264 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 Q5W150 140 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 ADNP2Q6IQ32 1131 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 ABHD12BQ7Z5M8 362 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 SNX20Q7Z614 316 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 SLC22A9Q8IVM8 553 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 MSRB3Q8IXL7 192 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 DEFB107AQ8IZN7 70 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 C10orf111Q8N326 155 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZNF561Q8N587 486 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 CCNYL1Q8N7R7 359 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR2L3Q8NG85 312 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR4S2Q8NH73 311 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 PHOSPHO2Q8TCD6 241 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 EEF1AKMT1Q8WVE0 214 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 DEDD2Q8WXF8 326 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 TUBGCP3Q96CW5 907 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 C19orf60Q96EN9 201 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 TMA16Q96EY4 203 aaKnown RBP2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 DUS3LQ96G46 650 aaKnown RBP2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 HBEGFQ99075 208 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 P2RX4Q99571 388 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 NDFIP1Q9BT67 221 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 THTPAQ9BU02 230 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 TRIM4Q9C037 500 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 SPNS1Q9H2V7 528 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 HEBP1Q9NRV9 189 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 CMTM6Q9NX76 183 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 STX18Q9P2W9 335 aaKnown RBP2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZNF282Q9UDV7 671 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 CD300AQ9UGN4 299 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 LSM7Q9UK45 103 aaKnown RBP2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 BTRCQ9Y297 605 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 FIS1Q9Y3D6 152 aa2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 MKI67P46013 3256 aaKnown RBP2.15□□□□□ -2.07
HMGB1P11-201ENST00000413899 PCDH15Q96QU1 1955 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 IGHV3-74A0A0B4J1X5 117 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 GLYATL1P3A0A0U1RQE8 302 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 SLC5A10A0PJK1 596 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 TRPC5OSA6NMA1 111 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 MRASO14807 208 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 AZIN1O14977 448 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 KMOO15229 486 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 GYG2O15488 501 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 SMIM24O75264 130 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 PSIP1O75475 530 aaKnown RBP2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 EEDO75530 441 aaKnown RBP2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 UTS2O95399 124 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 ETHE1O95571 254 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 CT62P0C5K7 136 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 ERGP11308 486 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 NEFHP12036 1026 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 HLA-EP13747 358 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 PSMC3P17980 439 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 HRH1P35367 487 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 GZMMP51124 257 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 TPMTP51580 245 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 AQP4P55087 323 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 ACTA2P62736 377 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms