RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 ENDOGQ14249 297 aaKnown RBP12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 CD226Q15762 336 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 PPP1R3BQ86XI6 285 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 OR13G1Q8NGZ3 307 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 THOC3Q96J01 351 aaKnown RBP12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 PTPRDP23468 1912 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 IGKV1D-16P01601 117 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 RPLP1P05386 114 aaKnown RBP12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 ZNF735P0CB33 412 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 GJA4P35212 333 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 GALR1P47211 349 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 HTR5AP47898 357 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 RPS23P62266 143 aaKnown RBP12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 KISS1Q15726 138 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 ZNF343Q6P1L6 599 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 REEP6Q96HR9 211 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 MS4A10Q96PG2 267 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 RYDENQ9NUL5 291 aaKnown RBP12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 FAM221BA6H8Z2 402 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 H0YIZ8 118 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 LILRB3O75022 631 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 CISD3P0C7P0 127 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 PEBP1P30086 187 aaKnown RBP12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 ZNF117Q03924 483 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 TCTN1Q2MV58 587 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 C1QL3Q5VWW1 255 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 LRRC18Q8N456 261 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 TMEM52Q8NDY8 209 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 LMX1AQ8TE12 382 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 PATE1Q8WXA2 126 aa12.33□□□□□ -0.44
CLTCL1-201ENST00000412649 ABHD16AO95870 558 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 ZNF708P17019 499 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 ADPRHP54922 357 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 HIST1H3AP68431 136 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 DCDP81605 110 aaKnown RBP12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 EWSR1Q01844 656 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 FAM78AQ5JUQ0 283 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 FDX2Q6P4F2 183 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 C6orf201Q7Z4U5 140 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 OR10AD1Q8NGE0 317 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 RARRES2Q99969 163 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 CYR61O00622 381 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 ATP6V0CP27449 155 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 ROM1Q03395 351 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 THEM4Q5T1C6 240 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 PLCXD3Q63HM9 321 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 RTL10Q7L3V2 364 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 CCDC54Q8NEL0 328 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 OR4F5Q8NH21 305 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 KLHDC7BQ96G42 594 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 OR4F4Q96R69 305 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 PRR32B1ATL7 298 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 FCGR3AP08637 254 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 ASAH2BP0C7U1 165 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 TMEM241Q24JQ0 296 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 ADAT3Q96EY9 351 aaPredicted RBP12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 AICDAQ9GZX7 198 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 SRPK3Q9UPE1 567 aa12.32□□□□□ -0.44
CLTCL1-201ENST00000412649 H3BP45 60 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 PGA4P0DJD7 388 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 PGA5P0DJD9 388 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 MDKP21741 143 aaPredicted RBP12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 FAM69BQ5VUD6 431 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 CYTL1Q9NRR1 136 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 OR14J1Q9UGF5 321 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 SLCO1B1Q9Y6L6 691 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 RABIFP47224 123 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 ERVS71-1P61550 626 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 C17orf67Q0P5P2 114 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 PYY3Q5JQD4 70 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 TSPO2Q5TGU0 170 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 SLC35E3Q7Z769 313 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 APCDD1LQ8NCL9 501 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 PECRQ9BY49 303 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 TNS1Q9HBL0 1735 aaKnown RBP12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 A0A1W2PPV4 95 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 ZNF320A2RRD8 509 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 LYPD3O95274 346 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 GCGP01275 180 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 LYZL2Q7Z4W2 148 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 GJC3Q8NFK1 279 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 ZNF845Q96IR2 970 aaPredicted RBP12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 VAMP8Q9BV40 100 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 CHST5Q9GZS9 411 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 CTDSP1Q9GZU7 261 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 FKBP11Q9NYL4 201 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 MMACHCQ9Y4U1 282 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 C2orf72A6NCS6 295 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 HSD17B6O14756 317 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 SRSF4Q08170 494 aaKnown RBP12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 LIAT1Q6ZQX7 453 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 FAM174AQ8TBP5 190 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 PIGCQ92535 297 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 HSF4Q9ULV5 492 aa12.31□□□□□ -0.44
CLTCL1-201ENST00000412649 HRKO00198 91 aa12.3□□□□□ -0.44
CLTCL1-201ENST00000412649 MMP16P51512 607 aa12.3□□□□□ -0.44
CLTCL1-201ENST00000412649 SLC37A2Q8TED4 501 aa12.3□□□□□ -0.44
CLTCL1-201ENST00000412649 IL1F10Q8WWZ1 152 aa12.3□□□□□ -0.44
CLTCL1-201ENST00000412649 GTF3AQ92664 365 aaKnown RBP12.3□□□□□ -0.44
CLTCL1-201ENST00000412649 AP1S3Q96PC3 154 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms