RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 NDUFB7P17568 137 aa16.12■□□□□ 0.17
TSPAN4-209ENST00000409543 ISL1P61371 349 aa16.12■□□□□ 0.17
TSPAN4-209ENST00000409543 SNRPGP62308 76 aaKnown RBP16.12■□□□□ 0.17
TSPAN4-209ENST00000409543 ZNF85Q03923 595 aa16.12■□□□□ 0.17
TSPAN4-209ENST00000409543 SMIM21Q3B7S5 101 aa16.12■□□□□ 0.17
TSPAN4-209ENST00000409543 Q8N7P7 452 aa16.12■□□□□ 0.17
TSPAN4-209ENST00000409543 ZNRF1Q8ND25 227 aa16.12■□□□□ 0.17
TSPAN4-209ENST00000409543 SGMS2Q8NHU3 365 aa16.12■□□□□ 0.17
TSPAN4-209ENST00000409543 PCDHGB1Q9Y5G3 927 aa16.12■□□□□ 0.17
TSPAN4-209ENST00000409543 A0A0U1RQK1 487 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 ANKRD61A6NGH8 418 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 M0R1W7 72 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 SYT7O43581 403 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 ENTPD6O75354 484 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 MPZP25189 248 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 GUCA2AQ02747 115 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 OCLNQ16625 522 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 ODF4Q2M2E3 257 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 ZIK1Q3SY52 487 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 MEDAGQ5VYS4 303 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 SHISA2Q6UWI4 295 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 FAM220AQ7Z4H9 259 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 PDZD9Q8IXQ8 264 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 PIP4P2Q8N4L2 257 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 CBR4Q8N4T8 237 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 TBC1D15Q8TC07 691 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 NPRL2Q8WTW4 380 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 SSMEM1Q8WWF3 244 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 ZNF488Q96MN9 340 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 NRIP2Q9BQI9 281 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 ADI1Q9BV57 179 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 PLEKHA1Q9HB21 404 aa16.11■□□□□ 0.17
TSPAN4-209ENST00000409543 TRBV23-1A0A0A0MS06 115 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 A0A1W2PQ09 198 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 FAM181BA6NEQ2 426 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 RFPL4AA6NLU0 287 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 POM121CA8CG34 1229 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 RFPL4AL1F8VTS6 287 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 RNASEK-C17orf49H0YIS7 233 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 J3QRE1 110 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 PRDX2P32119 198 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 ACTC1P68032 377 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 ACTA1P68133 377 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 TP53I3Q53FA7 332 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 KCTD20Q7Z5Y7 419 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 LDLRAD3Q86YD5 345 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 PRSS35Q8N3Z0 413 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 CD177Q8N6Q3 437 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 TMEM185AQ8NFB2 350 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 TNFRSF14Q92956 283 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 CHIAQ9BZP6 476 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 PKIBQ9C010 78 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 METTL8Q9H825 291 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 UNKLQ9H9P5 680 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 SIRT7Q9NRC8 400 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 TNFRSF19Q9NS68 423 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 GNG8Q9UK08 70 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 SLC7A11Q9UPY5 501 aa16.1■□□□□ 0.17
TSPAN4-209ENST00000409543 EBAG9O00559 213 aa16.09■□□□□ 0.17
TSPAN4-209ENST00000409543 NXPH2O95156 264 aa16.09■□□□□ 0.17
TSPAN4-209ENST00000409543 UBCP0CG48 685 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-209ENST00000409543 IL24Q13007 206 aa16.09■□□□□ 0.17
TSPAN4-209ENST00000409543 UBE2V2Q15819 145 aa16.09■□□□□ 0.17
TSPAN4-209ENST00000409543 FIP1L1Q6UN15 594 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-209ENST00000409543 ANGPTL5Q86XS5 388 aa16.09■□□□□ 0.17
TSPAN4-209ENST00000409543 CALHM1Q8IU99 346 aa16.09■□□□□ 0.17
TSPAN4-209ENST00000409543 ZNF561Q8N587 486 aa16.09■□□□□ 0.17
TSPAN4-209ENST00000409543 TAF15Q92804 592 aaKnown RBP eCLIP16.09■□□□□ 0.17
TSPAN4-209ENST00000409543 RNF166Q96A37 237 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-209ENST00000409543 C10orf35Q96D05 121 aa16.09■□□□□ 0.17
TSPAN4-209ENST00000409543 RNFT2Q96EX2 444 aa16.09■□□□□ 0.17
TSPAN4-209ENST00000409543 ELL3Q9HB65 397 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-209ENST00000409543 HES4Q9HCC6 221 aa16.09■□□□□ 0.17
TSPAN4-209ENST00000409543 CAB39Q9Y376 341 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-209ENST00000409543 FAM96BQ9Y3D0 163 aa16.09■□□□□ 0.17
TSPAN4-209ENST00000409543 FAM230AA0A1W2PPH8 454 aa16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 DAPL1A0PJW8 107 aa16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 SNTNA6NMZ2 147 aa16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 H3BSH0 61 aa16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 SLC1A7O00341 560 aa16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 GATBO75879 557 aaKnown RBP16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 SERPINA3P01011 423 aa16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 CRYBA1P05813 215 aa16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 EEF1B2P24534 225 aaKnown RBP16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 KIR3DL2P43630 455 aa16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 IER3P46695 156 aa16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 CAPZA1P52907 286 aa16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 ERVK11-1P61568 191 aa16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 BLMHQ13867 455 aa16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 NCR3LG1Q68D85 454 aa16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 TRMT10AQ8TBZ6 339 aaKnown RBP16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 MBOAT4Q96T53 435 aa16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 C9orf16Q9BUW7 83 aa16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 CHST5Q9GZS9 411 aa16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 MMP24Q9Y5R2 645 aa16.08■□□□□ 0.16
TSPAN4-209ENST00000409543 LOC107986453A0A1B0GWG9 222 aa16.07■□□□□ 0.16
TSPAN4-209ENST00000409543 NPFFO15130 113 aa16.07■□□□□ 0.16
TSPAN4-209ENST00000409543 SLC16A6O15403 523 aa16.07■□□□□ 0.16
TSPAN4-209ENST00000409543 IGHV4-59P01825 116 aa16.07■□□□□ 0.16
TSPAN4-209ENST00000409543 MDKP21741 143 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms