RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 FJX1Q86VR8 437 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 BATF2Q8N1L9 274 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 ZSCAN4Q8NAM6 433 aaPredicted RBP12.01□□□□□ -0.49
GPNMB-203ENST00000409458 OR51F2Q8NH61 342 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 SLAMF9Q96A28 289 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 USB1Q9BQ65 265 aaKnown RBP12.01□□□□□ -0.49
GPNMB-203ENST00000409458 OR10A4Q9H209 315 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 SCPEP1Q9HB40 452 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 TUBG2Q9NRH3 451 aa12.01□□□□□ -0.49
GPNMB-203ENST00000409458 FAM90A27PA6NNH2 459 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 H0YL77 283 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 MFNGO00587 321 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 ZNF780AO75290 641 aaPredicted RBP12□□□□□ -0.49
GPNMB-203ENST00000409458 RBBP9O75884 186 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 MELTFP08582 738 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 GTF2F2P13984 249 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 HIST1H1DP16402 221 aaKnown RBP12□□□□□ -0.49
GPNMB-203ENST00000409458 KITLGP21583 273 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 CPT2P23786 658 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 GABRR1P24046 479 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 CD40P25942 277 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 SLC6A1P30531 599 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 ASCL1P50553 236 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 FABP6P51161 128 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 GNG3P63215 75 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 NKX6-1P78426 367 aaPredicted RBP12□□□□□ -0.49
GPNMB-203ENST00000409458 DYRK1AQ13627 763 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 FAM189A2Q15884 450 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 PCGF3Q3KNV8 242 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 ZNF718Q3SXZ3 478 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 OLFML2AQ68BL7 652 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 RGS7BPQ6MZT1 257 aaPredicted RBP12□□□□□ -0.49
GPNMB-203ENST00000409458 WFDC8Q8IUA0 241 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 C1orf174Q8IYL3 243 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 OR8S1Q8NH09 359 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 NUDCD2Q8WVJ2 157 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 RAB3CQ96E17 227 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 ARHGAP5-AS1Q96IT6 56 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 RTL8AQ9BWD3 113 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 HRASLSQ9HDD0 168 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 NLKQ9UBE8 527 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 KCNK7Q9Y2U2 307 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 ESPL1Q14674 2120 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 POLEQ07864 2286 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 HEATR1Q9H583 2144 aaKnown RBP12□□□□□ -0.49
GPNMB-203ENST00000409458 FAM240BA0A1B0GVZ2 78 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 FUOMA2VDF0 154 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 ATXN7O15265 892 aaPredicted RBP12□□□□□ -0.49
GPNMB-203ENST00000409458 SYNGR1O43759 233 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 TIMM8AO60220 97 aaPredicted RBP12□□□□□ -0.49
GPNMB-203ENST00000409458 FCER2P06734 321 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 GSTT2BP0CG30 244 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 BCL3P20749 454 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 GCH1P30793 250 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 CHRNB4P30926 498 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 NPBWR2P48146 333 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 AP3S2P59780 193 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 PIGYQ3MUY2 71 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 FAAP20Q6NZ36 180 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 HAGHLQ6PII5 290 aaPredicted RBP12□□□□□ -0.49
GPNMB-203ENST00000409458 OSR2Q8N2R0 312 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 OR8G5Q8NG78 346 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 C7orf50Q9BRJ6 194 aaKnown RBP12□□□□□ -0.49
GPNMB-203ENST00000409458 ZNF581Q9P0T4 197 aa12□□□□□ -0.49
GPNMB-203ENST00000409458 CENPXA8MT69 81 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 MLNRO43193 412 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 SSX5O60225 188 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 GSTP1P09211 210 aaKnown RBP11.99□□□□□ -0.49
GPNMB-203ENST00000409458 CSF1P09603 554 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 BLVRBP30043 206 aaPredicted RBP11.99□□□□□ -0.49
GPNMB-203ENST00000409458 SSBP1Q04837 148 aaKnown RBP11.99□□□□□ -0.49
GPNMB-203ENST00000409458 PLA1AQ53H76 456 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 Q6ZR03 302 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 TRAPPC6BQ86SZ2 158 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 ZNF573Q86YE8 665 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 SAXO1Q8IYX7 474 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 FBXL14Q8N1E6 418 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 DUSP18Q8NEJ0 188 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 OR10AD1Q8NGE0 317 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 UPRTQ96BW1 309 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 MICU1Q9BPX6 476 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 PECRQ9BY49 303 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 OR51I2Q9H344 312 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 TMEM100Q9NV29 134 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 MTCH1Q9NZJ7 389 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 NOP16Q9Y3C1 178 aaKnown RBP11.99□□□□□ -0.49
GPNMB-203ENST00000409458 PCNX1Q96RV3 2341 aa11.99□□□□□ -0.49
GPNMB-203ENST00000409458 NKX2-6A6NCS4 301 aa11.98□□□□□ -0.49
GPNMB-203ENST00000409458 F8VVB4 439 aa11.98□□□□□ -0.49
GPNMB-203ENST00000409458 F8VWA3 439 aa11.98□□□□□ -0.49
GPNMB-203ENST00000409458 GEMIN2O14893 280 aaKnown RBP11.98□□□□□ -0.49
GPNMB-203ENST00000409458 GLRXP35754 106 aa11.98□□□□□ -0.49
GPNMB-203ENST00000409458 BCAP31P51572 246 aa11.98□□□□□ -0.49
GPNMB-203ENST00000409458 ACTBP60709 375 aa11.98□□□□□ -0.49
GPNMB-203ENST00000409458 ACTG1P63261 375 aa11.98□□□□□ -0.49
GPNMB-203ENST00000409458 OR8G1Q15617 311 aa11.98□□□□□ -0.49
GPNMB-203ENST00000409458 TAF9Q16594 264 aa11.98□□□□□ -0.49
GPNMB-203ENST00000409458 SIGIRRQ6IA17 410 aa11.98□□□□□ -0.49
GPNMB-203ENST00000409458 VHLLQ6RSH7 139 aa11.98□□□□□ -0.49
GPNMB-203ENST00000409458 PLET1Q6UQ28 207 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms