RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 LCN8Q6JVE9 175 aa13.3□□□□□ -0.28
CHMP3-203ENST00000409225 PIGWQ7Z7B1 504 aa13.3□□□□□ -0.28
CHMP3-203ENST00000409225 ERI1Q8IV48 349 aaKnown RBP13.3□□□□□ -0.28
CHMP3-203ENST00000409225 MUC7Q8TAX7 377 aa13.3□□□□□ -0.28
CHMP3-203ENST00000409225 CAPSLQ8WWF8 208 aa13.3□□□□□ -0.28
CHMP3-203ENST00000409225 ZFPL1O95159 310 aa13.29□□□□□ -0.28
CHMP3-203ENST00000409225 TK1P04183 234 aa13.29□□□□□ -0.28
CHMP3-203ENST00000409225 IGHV1-8P0DP01 117 aa13.29□□□□□ -0.28
CHMP3-203ENST00000409225 CD24P25063 80 aa13.29□□□□□ -0.28
CHMP3-203ENST00000409225 THBS3P49746 956 aa13.29□□□□□ -0.28
CHMP3-203ENST00000409225 NUDT2P50583 147 aa13.29□□□□□ -0.28
CHMP3-203ENST00000409225 CEACAM21Q3KPI0 293 aa13.29□□□□□ -0.28
CHMP3-203ENST00000409225 BATF2Q8N1L9 274 aa13.29□□□□□ -0.28
CHMP3-203ENST00000409225 POC1AQ8NBT0 407 aa13.29□□□□□ -0.28
CHMP3-203ENST00000409225 OR8D4Q8NGM9 314 aa13.29□□□□□ -0.28
CHMP3-203ENST00000409225 FAM81AQ8TBF8 368 aa13.29□□□□□ -0.28
CHMP3-203ENST00000409225 BCAS4Q8TDM0 211 aa13.29□□□□□ -0.28
CHMP3-203ENST00000409225 INTS14Q96SY0 518 aa13.29□□□□□ -0.28
CHMP3-203ENST00000409225 NMNAT2Q9BZQ4 307 aa13.29□□□□□ -0.28
CHMP3-203ENST00000409225 DCAF13Q9NV06 445 aaKnown RBP13.29□□□□□ -0.28
CHMP3-203ENST00000409225 ZMAT5Q9UDW3 170 aaKnown RBP13.29□□□□□ -0.28
CHMP3-203ENST00000409225 OR14J1Q9UGF5 321 aa13.29□□□□□ -0.28
CHMP3-203ENST00000409225 SAMD4AQ9UPU9 718 aaKnown RBP13.29□□□□□ -0.28
CHMP3-203ENST00000409225 ZNF728P0DKX0 622 aa13.28□□□□□ -0.28
CHMP3-203ENST00000409225 C9orf152Q5JTZ5 239 aa13.28□□□□□ -0.28
CHMP3-203ENST00000409225 MINOS1Q5TGZ0 78 aa13.28□□□□□ -0.28
CHMP3-203ENST00000409225 GLYATQ6IB77 296 aa13.28□□□□□ -0.28
CHMP3-203ENST00000409225 MOB3CQ70IA8 216 aa13.28□□□□□ -0.28
CHMP3-203ENST00000409225 C16orf82Q7Z2V1 217 aa13.28□□□□□ -0.28
CHMP3-203ENST00000409225 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-203ENST00000409225 OR8B12Q8NGG6 310 aa13.28□□□□□ -0.28
CHMP3-203ENST00000409225 AKR1E2Q96JD6 320 aa13.28□□□□□ -0.28
CHMP3-203ENST00000409225 OR8B4Q96RC9 309 aa13.28□□□□□ -0.28
CHMP3-203ENST00000409225 PRR25Q96S07 402 aa13.28□□□□□ -0.28
CHMP3-203ENST00000409225 TBC1D23Q9NUY8 699 aa13.28□□□□□ -0.28
CHMP3-203ENST00000409225 LSM4Q9Y4Z0 139 aaKnown RBP13.28□□□□□ -0.28
CHMP3-203ENST00000409225 MINOS1-NBL1R4GNA1 71 aa13.28□□□□□ -0.28
CHMP3-203ENST00000409225 RRM2P31350 389 aa13.27□□□□□ -0.29
CHMP3-203ENST00000409225 ACTA2P62736 377 aa13.27□□□□□ -0.29
CHMP3-203ENST00000409225 ACTG2P63267 376 aa13.27□□□□□ -0.29
CHMP3-203ENST00000409225 ACTC1P68032 377 aa13.27□□□□□ -0.29
CHMP3-203ENST00000409225 ACTA1P68133 377 aa13.27□□□□□ -0.29
CHMP3-203ENST00000409225 LINC01590Q5TEZ4 76 aa13.27□□□□□ -0.29
CHMP3-203ENST00000409225 RPL13AP3Q6NVV1 102 aa13.27□□□□□ -0.29
CHMP3-203ENST00000409225 C18orf65Q6ZTR6 163 aa13.27□□□□□ -0.29
CHMP3-203ENST00000409225 HOPXQ9BPY8 73 aaPredicted RBP13.27□□□□□ -0.29
CHMP3-203ENST00000409225 SLC25A33Q9BSK2 321 aa13.27□□□□□ -0.29
CHMP3-203ENST00000409225 LIN7BQ9HAP6 207 aa13.27□□□□□ -0.29
CHMP3-203ENST00000409225 OR5B21A6NL26 309 aa13.26□□□□□ -0.29
CHMP3-203ENST00000409225 NUDT19A8MXV4 375 aa13.26□□□□□ -0.29
CHMP3-203ENST00000409225 NXPH2O95156 264 aa13.26□□□□□ -0.29
CHMP3-203ENST00000409225 RBP4P02753 201 aa13.26□□□□□ -0.29
CHMP3-203ENST00000409225 PGA5P0DJD9 388 aa13.26□□□□□ -0.29
CHMP3-203ENST00000409225 GSTT1P30711 240 aa13.26□□□□□ -0.29
CHMP3-203ENST00000409225 BLVRAP53004 296 aa13.26□□□□□ -0.29
CHMP3-203ENST00000409225 EDDM3BP56851 147 aa13.26□□□□□ -0.29
CHMP3-203ENST00000409225 RPL23AP62750 156 aaKnown RBP13.26□□□□□ -0.29
CHMP3-203ENST00000409225 PLCXD3Q63HM9 321 aa13.26□□□□□ -0.29
CHMP3-203ENST00000409225 KCTD18Q6PI47 426 aaPredicted RBP13.26□□□□□ -0.29
CHMP3-203ENST00000409225 C8orf86Q6ZUL3 223 aa13.26□□□□□ -0.29
CHMP3-203ENST00000409225 OSR2Q8N2R0 312 aa13.26□□□□□ -0.29
CHMP3-203ENST00000409225 ASCC1Q8N9N2 400 aaKnown RBP13.26□□□□□ -0.29
CHMP3-203ENST00000409225 OR5A2Q8NGI9 324 aa13.26□□□□□ -0.29
CHMP3-203ENST00000409225 RP9Q8TA86 221 aaKnown RBP13.26□□□□□ -0.29
CHMP3-203ENST00000409225 TSSK6Q9BXA6 273 aa13.26□□□□□ -0.29
CHMP3-203ENST00000409225 MED20Q9H944 212 aa13.26□□□□□ -0.29
CHMP3-203ENST00000409225 VIPAS39Q9H9C1 493 aa13.26□□□□□ -0.29
CHMP3-203ENST00000409225 IGHV2-26A0A0B4J1V2 119 aa13.25□□□□□ -0.29
CHMP3-203ENST00000409225 LCE6AA0A183 80 aa13.25□□□□□ -0.29
CHMP3-203ENST00000409225 PSMB11A5LHX3 300 aa13.25□□□□□ -0.29
CHMP3-203ENST00000409225 RAMP3O60896 148 aa13.25□□□□□ -0.29
CHMP3-203ENST00000409225 SEMG1P04279 462 aa13.25□□□□□ -0.29
CHMP3-203ENST00000409225 COX4I1P13073 169 aa13.25□□□□□ -0.29
CHMP3-203ENST00000409225 MAP2K3P46734 347 aa13.25□□□□□ -0.29
CHMP3-203ENST00000409225 C8orf82Q6P1X6 216 aaPredicted RBP13.25□□□□□ -0.29
CHMP3-203ENST00000409225 SHFQ7M4L6 423 aa13.25□□□□□ -0.29
CHMP3-203ENST00000409225 ZNF676Q8N7Q3 588 aa13.25□□□□□ -0.29
CHMP3-203ENST00000409225 OR9Q2Q8NGE9 314 aa13.25□□□□□ -0.29
CHMP3-203ENST00000409225 OR4Q3Q8NH05 313 aa13.25□□□□□ -0.29
CHMP3-203ENST00000409225 STMN2Q93045 179 aa13.25□□□□□ -0.29
CHMP3-203ENST00000409225 ZNF714Q96N38 554 aa13.25□□□□□ -0.29
CHMP3-203ENST00000409225 IL20Q9NYY1 176 aa13.25□□□□□ -0.29
CHMP3-203ENST00000409225 K7N7A8 449 aa13.24□□□□□ -0.29
CHMP3-203ENST00000409225 OR2F2O95006 317 aa13.24□□□□□ -0.29
CHMP3-203ENST00000409225 AMY1AP04745 511 aa13.24□□□□□ -0.29
CHMP3-203ENST00000409225 AMY2AP04746 511 aa13.24□□□□□ -0.29
CHMP3-203ENST00000409225 LYNP07948 512 aa13.24□□□□□ -0.29
CHMP3-203ENST00000409225 MYCNOSP40205 109 aa13.24□□□□□ -0.29
CHMP3-203ENST00000409225 HAAOP46952 286 aa13.24□□□□□ -0.29
CHMP3-203ENST00000409225 RAB25P57735 213 aa13.24□□□□□ -0.29
CHMP3-203ENST00000409225 IL18R1Q13478 541 aa13.24□□□□□ -0.29
CHMP3-203ENST00000409225 OR2W3Q7Z3T1 314 aa13.24□□□□□ -0.29
CHMP3-203ENST00000409225 ZNF329Q86UD4 541 aa13.24□□□□□ -0.29
CHMP3-203ENST00000409225 Q8NFD4 153 aa13.24□□□□□ -0.29
CHMP3-203ENST00000409225 THEM6Q8WUY1 208 aa13.24□□□□□ -0.29
CHMP3-203ENST00000409225 OTULINQ96BN8 352 aa13.24□□□□□ -0.29
CHMP3-203ENST00000409225 PYURFQ96I23 114 aa13.24□□□□□ -0.29
CHMP3-203ENST00000409225 BTBD10Q9BSF8 475 aa13.24□□□□□ -0.29
CHMP3-203ENST00000409225 NIPAL2Q9H841 368 aa13.24□□□□□ -0.29
CHMP3-203ENST00000409225 VNN3Q9NY84 501 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms