RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 A0A1W2PP11 408 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 TCRBV21S2A2A0A5A6 115 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 ZNF705FA8MVS1 300 aaPredicted RBP11.26□□□□□ -0.61
HERC3-203ENST00000407637 PLRG1O43660 514 aaKnown RBP11.26□□□□□ -0.61
HERC3-203ENST00000407637 CSTAP01040 98 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 ZNF705DP0CH99 300 aaPredicted RBP11.26□□□□□ -0.61
HERC3-203ENST00000407637 ZNF705BP0CI00 300 aaPredicted RBP11.26□□□□□ -0.61
HERC3-203ENST00000407637 PDLIM4P50479 330 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 FKBP1BP68106 108 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 NNATQ16517 81 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 PRSS8Q16651 343 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 SSX7Q7RTT5 188 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 MRPL52Q86TS9 123 aaKnown RBP11.26□□□□□ -0.61
HERC3-203ENST00000407637 SLC22A24Q8N4F4 322 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 GATSQ8NAP1 163 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 OR8G5Q8NG78 346 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 KTI12Q96EK9 354 aaPredicted RBP11.26□□□□□ -0.61
HERC3-203ENST00000407637 SCARF2Q96GP6 870 aaPredicted RBP11.26□□□□□ -0.61
HERC3-203ENST00000407637 IGSF21Q96ID5 467 aa11.26□□□□□ -0.61
HERC3-203ENST00000407637 FAM230AA0A1W2PPH8 454 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 TMEM14DPA8MWL7 114 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 GSTP1P09211 210 aaKnown RBP11.25□□□□□ -0.61
HERC3-203ENST00000407637 CEACAM8P31997 349 aaPredicted RBP11.25□□□□□ -0.61
HERC3-203ENST00000407637 CCKARP32238 428 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 SNU13P55769 128 aaKnown RBP11.25□□□□□ -0.61
HERC3-203ENST00000407637 SOX8P57073 446 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 ROM1Q03395 351 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 PRICKLE4Q2TBC4 344 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 KCTD18Q6PI47 426 aaPredicted RBP11.25□□□□□ -0.61
HERC3-203ENST00000407637 ZNF100Q8IYN0 542 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 OR52R1Q8NGF1 315 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 GPR119Q8TDV5 335 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 TMEM37Q8WXS4 190 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 EXTL1Q92935 676 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 G6PC2Q9NQR9 355 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 SERINC1Q9NRX5 453 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 CCL26Q9Y258 94 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 B4E171 279 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 C11orf98E9PRG8 122 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 NKX2-2O95096 273 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 ASGR1P07306 291 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 ASAH2BP0C7U1 165 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 HNF1AP20823 631 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 GPR3P46089 330 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 IDH3GP51553 393 aaPredicted RBP11.25□□□□□ -0.61
HERC3-203ENST00000407637 TMEM50BP56557 158 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 ERVS71-1P61550 626 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 KCNMB1Q16558 191 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 CLEC12BQ2HXU8 276 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 SP6Q3SY56 376 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 SULF2Q8IWU5 870 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 ACY3Q96HD9 319 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 TBX15Q96SF7 602 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 DAPP1Q9UN19 280 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 ZFP30Q9Y2G7 519 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 OR1A2Q9Y585 309 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 R4GMQ9 66 aa11.25□□□□□ -0.61
HERC3-203ENST00000407637 PPP5D1E7EU14 171 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 SOD2P04179 222 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 CEACAM1P13688 526 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 HSD11B1P28845 292 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 RAB7AP51149 207 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 PSG6Q00889 435 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 EWSR1Q01844 656 aaKnown RBP eCLIP11.24□□□□□ -0.61
HERC3-203ENST00000407637 MGAT2Q10469 447 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 EMC4Q5J8M3 183 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 RTL10Q7L3V2 364 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 C9orf40Q8IXQ3 194 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 OR52M1Q8NGK5 317 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 ADAT3Q96EY9 351 aaPredicted RBP11.24□□□□□ -0.61
HERC3-203ENST00000407637 SDSLQ96GA7 329 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 VN1R1Q9GZP7 353 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 CALHM2Q9HA72 323 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 P4HTMQ9NXG6 502 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 FUT9Q9Y231 359 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 MRPS2Q9Y399 296 aaKnown RBP11.24□□□□□ -0.61
HERC3-203ENST00000407637 PCNX3Q9H6A9 2034 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 LOC102723971A0A1B0GUV8 181 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 A0A1W2PPQ1 181 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 SLC16A7O60669 478 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 SRSF10O75494 262 aaKnown RBP11.24□□□□□ -0.61
HERC3-203ENST00000407637 BGLAPP02818 100 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 OR10J1P30954 320 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 CDKN1BP46527 198 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 PNRC1Q12796 327 aaPredicted RBP11.24□□□□□ -0.61
HERC3-203ENST00000407637 DEGS2Q6QHC5 323 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 DGAT2L6Q6ZPD8 337 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 ANGPTL4Q9BY76 406 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 LRFN1Q9P244 771 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 GNG13Q9P2W3 67 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 SLC7A11Q9UPY5 501 aa11.24□□□□□ -0.61
HERC3-203ENST00000407637 PHF3Q92576 2039 aaKnown RBP11.24□□□□□ -0.61
HERC3-203ENST00000407637 TRDCB7Z8K6 153 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 DBHP09172 617 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 ZNF43P17038 809 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 TMEM11P17152 192 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 GZMHP20718 246 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 CHRNB4P30926 498 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 UCP3P55916 312 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 EGR4Q05215 589 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms