RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 NAA40Q86UY6 237 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 HRASLSQ9HDD0 168 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 ZFP57Q9NU63 452 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 MPDZO75970 2070 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 IGLV3-32A0A0A0MS00 114 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 TOR1AO14656 332 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 GMDSO60547 372 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 SNAPC5O75971 98 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 LYPD3O95274 346 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 FCGR2CP31995 323 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 SLC25A53Q5H9E4 307 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 OR52W1Q6IF63 320 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 NLRC3Q7RTR2 1065 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 Q8IYB0 196 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 PLPPR2Q96GM1 343 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 C1orf123Q9NWV4 160 aa7.95□□□□□ -1.14
LIG4-202ENST00000405925 MED13LQ71F56 2210 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 ABCD4O14678 606 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 HSD17B6O14756 317 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 CTAG2O75638 210 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 CTXN2P0C2S0 81 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 LGALS4P56470 323 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 BAMBIQ13145 260 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 FCN2Q15485 313 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 ZNF808Q8N4W9 903 aaPredicted RBP7.94□□□□□ -1.14
LIG4-202ENST00000405925 OR4C16Q8NGL9 310 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 ZNRF4Q8WWF5 429 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 ASF1BQ9NVP2 202 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 TREM2Q9NZC2 230 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 RNF212BA8MTL3 300 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 ENSAO43768 121 aaKnown RBP7.94□□□□□ -1.14
LIG4-202ENST00000405925 IFNA5P01569 189 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 HIST1H1DP16402 221 aaKnown RBP7.94□□□□□ -1.14
LIG4-202ENST00000405925 NHLH1Q02575 133 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 ZNF92Q03936 586 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 TEX30Q5JUR7 227 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 VWA1Q6PCB0 445 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 OR2W3Q7Z3T1 314 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 GLRX5Q86SX6 157 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 DMBX1Q8NFW5 382 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 OR1K1Q8NGR3 316 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 ABHD1Q96SE0 405 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 FAAP24Q9BTP7 215 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 DPCDQ9BVM2 203 aaPredicted RBP7.94□□□□□ -1.14
LIG4-202ENST00000405925 CHST5Q9GZS9 411 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 MFFQ9GZY8 342 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 RANGRFQ9HD47 186 aaPredicted RBP7.94□□□□□ -1.14
LIG4-202ENST00000405925 ZMIZ1Q9ULJ6 1067 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 SULT1C2O00338 296 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 ZNF205O95201 554 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 IFNA17P01571 189 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 RRAS2P62070 204 aaPredicted RBP7.94□□□□□ -1.14
LIG4-202ENST00000405925 RHOUQ7L0Q8 258 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 PPIL3Q9H2H8 161 aaKnown RBP7.94□□□□□ -1.14
LIG4-202ENST00000405925 FLVCR2Q9UPI3 526 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 PTPRQQ9UMZ3 2332 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 ALPK3Q96L96 1907 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 SPG11Q96JI7 2443 aa7.94□□□□□ -1.14
LIG4-202ENST00000405925 AQP7O14520 342 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 EFNA2O43921 213 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 PDCD6O75340 191 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 IGHMP01871 453 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 LHX2P50458 406 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 MMP15P51511 669 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 DYRK1AQ13627 763 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 KCNJ8Q15842 424 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 RFESDQ8TAC1 157 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 MARCH1Q8TCQ1 289 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 ZNF837Q96EG3 531 aaPredicted RBP7.93□□□□□ -1.14
LIG4-202ENST00000405925 WDFY2Q96P53 400 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 CHST6Q9GZX3 395 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 RIMS4Q9H426 269 aaPredicted RBP7.93□□□□□ -1.14
LIG4-202ENST00000405925 ERRFI1Q9UJM3 462 aaPredicted RBP7.93□□□□□ -1.14
LIG4-202ENST00000405925 PPP1R3CQ9UQK1 317 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 PRELID3BQ9Y3B1 194 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 MAB21L2Q9Y586 359 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 CSAG2Q9Y5P2 127 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 USF3Q68DE3 2245 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 OXA1LQ15070 435 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 MSMO1Q15800 293 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 ADAM5Q6NVV9 412 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 SLC36A1Q7Z2H8 476 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 LRRTM1Q86UE6 522 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 LILRB2Q8N423 598 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 LRRC75AQ8NAA5 344 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 OR4D6Q8NGJ1 314 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 SEH1LQ96EE3 360 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 TINAGL1Q9GZM7 467 aaPredicted RBP7.93□□□□□ -1.14
LIG4-202ENST00000405925 CXXC4Q9H2H0 198 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 SLC17A5Q9NRA2 495 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 ZNF230Q9UIE0 474 aaPredicted RBP7.93□□□□□ -1.14
LIG4-202ENST00000405925 COL4A3Q01955 1670 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 A0A1W2PPH5 198 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 CEBPZOSA8MTT3 80 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 SIX6O95475 246 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 NFYAP23511 347 aaPredicted RBP7.93□□□□□ -1.14
LIG4-202ENST00000405925 CLDN18P56856 261 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 RAP2BP61225 183 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 SORDQ00796 357 aa7.93□□□□□ -1.14
LIG4-202ENST00000405925 HFEQ30201 348 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms