RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 SHPKQ9UHJ6 478 aa14.33□□□□□ -0.11
COL4A3BP-204ENST00000405807 AMBPP02760 352 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 RAB1AP62820 205 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 EIF2B1Q14232 305 aaKnown RBP14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 TANGO2Q6ICL3 276 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 OOSP2Q86WS3 158 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 CHST4Q8NCG5 386 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 ADAD2Q8NCV1 583 aaKnown RBP14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 FAM46BQ96A09 425 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 FAM131CQ96AQ9 280 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 SYT3Q9BQG1 590 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 CYTL1Q9NRR1 136 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 MRPL22Q9NWU5 206 aaKnown RBP14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 H0Y8X5 98 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 HCRTR1O43613 425 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 CCL5P13501 91 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 TAS2R31P59538 309 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 ZNF100Q8IYN0 542 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 GVQW1Q8N7I0 195 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 ZNF615Q8N8J6 731 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 ABHD6Q9BV23 337 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 RNF126Q9BV68 326 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 TPSD1Q9BZJ3 242 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 LRP12Q9Y561 859 aa14.33□□□□□ -0.12
COL4A3BP-204ENST00000405807 MPDZO75970 2070 aa14.32□□□□□ -0.12
COL4A3BP-204ENST00000405807 RAB27BO00194 218 aa14.32□□□□□ -0.12
COL4A3BP-204ENST00000405807 HRH1P35367 487 aa14.32□□□□□ -0.12
COL4A3BP-204ENST00000405807 C1orf194Q5T5A4 169 aa14.32□□□□□ -0.12
COL4A3BP-204ENST00000405807 VWA1Q6PCB0 445 aa14.32□□□□□ -0.12
COL4A3BP-204ENST00000405807 CAPNS2Q96L46 248 aa14.32□□□□□ -0.12
COL4A3BP-204ENST00000405807 A6NIZ1 184 aa14.32□□□□□ -0.12
COL4A3BP-204ENST00000405807 CYB5BO43169 146 aa14.32□□□□□ -0.12
COL4A3BP-204ENST00000405807 BGLAPP02818 100 aa14.32□□□□□ -0.12
COL4A3BP-204ENST00000405807 PNLIPP16233 465 aa14.32□□□□□ -0.12
COL4A3BP-204ENST00000405807 CXCR1P25024 350 aa14.32□□□□□ -0.12
COL4A3BP-204ENST00000405807 UBE2G2P60604 165 aa14.32□□□□□ -0.12
COL4A3BP-204ENST00000405807 RPL27P61353 136 aaKnown RBP14.32□□□□□ -0.12
COL4A3BP-204ENST00000405807 AWAT2Q6E213 333 aa14.32□□□□□ -0.12
COL4A3BP-204ENST00000405807 OR4D6Q8NGJ1 314 aa14.32□□□□□ -0.12
COL4A3BP-204ENST00000405807 R4GMQ9 66 aa14.32□□□□□ -0.12
COL4A3BP-204ENST00000405807 J3KRW8 73 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 MAOAP21397 527 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 DEFB110Q30KQ9 67 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 DTWD2Q8NBA8 298 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 OR5L2Q8NGL0 311 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 ABHD5Q8WTS1 349 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 ZNF524Q96C55 264 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 SAT2Q96F10 170 aaPredicted RBP14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 JSRP1Q96MG2 331 aaPredicted RBP14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 PCGF1Q9BSM1 259 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 FAM60AQ9NP50 221 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 B3GAT1Q9P2W7 334 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 TRAV36DV7A0A075B6V5 113 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 PRKNO60260 465 aaPredicted RBP14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 SCGB1D2O95969 90 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 ISG15P05161 165 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 CTSBP07858 339 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 CXCL1P09341 107 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 ACKR1Q16570 336 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 SLC22A25Q6T423 547 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 GRINAQ7Z429 371 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 MDGA2Q7Z553 956 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 YAF2Q8IY57 180 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 CMTM1Q8IZ96 169 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 ZSCAN4Q8NAM6 433 aaPredicted RBP14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 OR52N5Q8NH56 324 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 ZNF296Q8WUU4 475 aaPredicted RBP14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 PATE1Q8WXA2 126 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 FRZBQ92765 325 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 TOMM40LQ969M1 308 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 LRFN1Q9P244 771 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 EMC9Q9Y3B6 208 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 HS3ST3B1Q9Y662 390 aa14.31□□□□□ -0.12
COL4A3BP-204ENST00000405807 IGLV1-36A0A0B4J1U3 117 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 LOC107986453A0A1B0GWG9 222 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 C17orf105B2RV13 164 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 TNFRSF10CO14798 259 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 UTS2O95399 124 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 TK1P04183 234 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 HOXB2P14652 356 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 BCKDHBP21953 392 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 FCARP24071 287 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 SLC6A8P48029 635 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 NPY4RP50391 375 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 EFNA3P52797 238 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 C4orf17Q53FE4 359 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 ZNF585AQ6P3V2 769 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 ARHGEF39Q8N4T4 335 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 OR2V1Q8NHB1 315 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 MUCL1Q96DR8 90 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 PTPRSQ13332 1948 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 WIPF3A6NGB9 483 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 M0R296 226 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 SLC6A9P48067 706 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 TMEM33P57088 247 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 UBE2V1Q13404 147 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 SLC22A6Q4U2R8 563 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 LYPD6Q86Y78 171 aa14.3□□□□□ -0.12
COL4A3BP-204ENST00000405807 CD300LFQ8TDQ1 290 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms