RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 IL36GQ9NZH8 169 aa17.98■□□□□ 0.47
TPM1-208ENST00000404484 SULT1C2O00338 296 aa17.97■□□□□ 0.47
TPM1-208ENST00000404484 CSTBP04080 98 aaKnown RBP17.97■□□□□ 0.47
TPM1-208ENST00000404484 AP3S2P59780 193 aa17.97■□□□□ 0.47
TPM1-208ENST00000404484 ERVS71-1P61550 626 aa17.97■□□□□ 0.47
TPM1-208ENST00000404484 GNG3P63215 75 aa17.97■□□□□ 0.47
TPM1-208ENST00000404484 PSG7Q13046 419 aa17.97■□□□□ 0.47
TPM1-208ENST00000404484 SEZ6L2Q6UXD5 910 aa17.97■□□□□ 0.47
TPM1-208ENST00000404484 TMEM108Q6UXF1 575 aa17.97■□□□□ 0.47
TPM1-208ENST00000404484 SAXO1Q8IYX7 474 aa17.97■□□□□ 0.47
TPM1-208ENST00000404484 ACBD4Q8NC06 268 aa17.97■□□□□ 0.47
TPM1-208ENST00000404484 OR56B1Q8NGI3 324 aa17.97■□□□□ 0.47
TPM1-208ENST00000404484 COX4I2Q96KJ9 171 aa17.97■□□□□ 0.47
TPM1-208ENST00000404484 LPAR5Q9H1C0 372 aa17.97■□□□□ 0.47
TPM1-208ENST00000404484 SCPEP1Q9HB40 452 aa17.97■□□□□ 0.47
TPM1-208ENST00000404484 NGBQ9NPG2 151 aa17.97■□□□□ 0.47
TPM1-208ENST00000404484 ZNF732B4DXR9 585 aa17.96■□□□□ 0.47
TPM1-208ENST00000404484 ECDO95905 644 aaPredicted RBP17.96■□□□□ 0.47
TPM1-208ENST00000404484 CYB5AP00167 134 aa17.96■□□□□ 0.47
TPM1-208ENST00000404484 CD3GP09693 182 aa17.96■□□□□ 0.47
TPM1-208ENST00000404484 GSTT2BP0CG30 244 aa17.96■□□□□ 0.47
TPM1-208ENST00000404484 MGMTP16455 207 aa17.96■□□□□ 0.47
TPM1-208ENST00000404484 SERPINA2P20848 420 aa17.96■□□□□ 0.47
TPM1-208ENST00000404484 KITLGP21583 273 aa17.96■□□□□ 0.47
TPM1-208ENST00000404484 PRSS3P35030 304 aa17.96■□□□□ 0.47
TPM1-208ENST00000404484 RPS27AP62979 156 aaKnown RBP17.96■□□□□ 0.47
TPM1-208ENST00000404484 RGS7BPQ6MZT1 257 aaPredicted RBP17.96■□□□□ 0.47
TPM1-208ENST00000404484 C1QL2Q7Z5L3 287 aa17.96■□□□□ 0.47
TPM1-208ENST00000404484 ZNF573Q86YE8 665 aa17.96■□□□□ 0.47
TPM1-208ENST00000404484 TOMM5Q8N4H5 51 aa17.96■□□□□ 0.47
TPM1-208ENST00000404484 TMEM104Q8NE00 496 aa17.96■□□□□ 0.47
TPM1-208ENST00000404484 MRPS24Q96EL2 167 aaKnown RBP17.96■□□□□ 0.47
TPM1-208ENST00000404484 RNF170Q96K19 258 aa17.96■□□□□ 0.47
TPM1-208ENST00000404484 GAL3ST1Q99999 423 aa17.96■□□□□ 0.47
TPM1-208ENST00000404484 RTL8AQ9BWD3 113 aa17.96■□□□□ 0.47
TPM1-208ENST00000404484 AUNIPQ9H7T9 357 aa17.96■□□□□ 0.47
TPM1-208ENST00000404484 NPDC1Q9NQX5 325 aaPredicted RBP17.96■□□□□ 0.47
TPM1-208ENST00000404484 PURGQ9UJV8 347 aaKnown RBP17.96■□□□□ 0.47
TPM1-208ENST00000404484 LINC00854A0A1B0GVQ3 168 aa17.96■□□□□ 0.46
TPM1-208ENST00000404484 CENPXA8MT69 81 aa17.96■□□□□ 0.46
TPM1-208ENST00000404484 RAB27BO00194 218 aa17.96■□□□□ 0.46
TPM1-208ENST00000404484 CA6P23280 308 aa17.96■□□□□ 0.46
TPM1-208ENST00000404484 CPT2P23786 658 aa17.96■□□□□ 0.46
TPM1-208ENST00000404484 PTAFRP25105 342 aa17.96■□□□□ 0.46
TPM1-208ENST00000404484 GPM6AP51674 278 aa17.96■□□□□ 0.46
TPM1-208ENST00000404484 SSBP1Q04837 148 aaKnown RBP17.96■□□□□ 0.46
TPM1-208ENST00000404484 SNTB2Q13425 540 aaKnown RBP17.96■□□□□ 0.46
TPM1-208ENST00000404484 DNM1P46Q6ZS02 220 aa17.96■□□□□ 0.46
TPM1-208ENST00000404484 OR10R2Q8NGX6 335 aa17.96■□□□□ 0.46
TPM1-208ENST00000404484 OR8S1Q8NH09 359 aa17.96■□□□□ 0.46
TPM1-208ENST00000404484 OR52I2Q8NH67 350 aa17.96■□□□□ 0.46
TPM1-208ENST00000404484 C7orf50Q9BRJ6 194 aaKnown RBP17.96■□□□□ 0.46
TPM1-208ENST00000404484 TM2D1Q9BX74 207 aa17.96■□□□□ 0.46
TPM1-208ENST00000404484 BANF2Q9H503 90 aa17.96■□□□□ 0.46
TPM1-208ENST00000404484 CRIM1Q9NZV1 1036 aa17.96■□□□□ 0.46
TPM1-208ENST00000404484 RBMX2Q9Y388 322 aaKnown RBP17.96■□□□□ 0.46
TPM1-208ENST00000404484 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.95■□□□□ 0.46
TPM1-208ENST00000404484 SPRY1O43609 319 aaPredicted RBP17.95■□□□□ 0.46
TPM1-208ENST00000404484 LANCL1O43813 399 aa17.95■□□□□ 0.46
TPM1-208ENST00000404484 TIMM8AO60220 97 aaPredicted RBP17.95■□□□□ 0.46
TPM1-208ENST00000404484 GTF2F2P13984 249 aa17.95■□□□□ 0.46
TPM1-208ENST00000404484 CD40P25942 277 aa17.95■□□□□ 0.46
TPM1-208ENST00000404484 GLRXP35754 106 aa17.95■□□□□ 0.46
TPM1-208ENST00000404484 MPV17P39210 176 aa17.95■□□□□ 0.46
TPM1-208ENST00000404484 GDNFP39905 211 aa17.95■□□□□ 0.46
TPM1-208ENST00000404484 VEGFCP49767 419 aa17.95■□□□□ 0.46
TPM1-208ENST00000404484 ARL6IP1Q15041 203 aa17.95■□□□□ 0.46
TPM1-208ENST00000404484 RNASE12Q5GAN4 147 aaKnown RBP17.95■□□□□ 0.46
TPM1-208ENST00000404484 MKXQ8IYA7 352 aa17.95■□□□□ 0.46
TPM1-208ENST00000404484 FAM89BQ8N5H3 189 aa17.95■□□□□ 0.46
TPM1-208ENST00000404484 ZNF611Q8N823 705 aa17.95■□□□□ 0.46
TPM1-208ENST00000404484 CHST4Q8NCG5 386 aa17.95■□□□□ 0.46
TPM1-208ENST00000404484 OR8G5Q8NG78 346 aa17.95■□□□□ 0.46
TPM1-208ENST00000404484 OR51T1Q8NGJ9 327 aa17.95■□□□□ 0.46
TPM1-208ENST00000404484 RNASE6Q93091 150 aaKnown RBP17.95■□□□□ 0.46
TPM1-208ENST00000404484 POM121Q96HA1 1249 aa17.95■□□□□ 0.46
TPM1-208ENST00000404484 SELENOIQ9C0D9 397 aa17.95■□□□□ 0.46
TPM1-208ENST00000404484 C11orf54Q9H0W9 315 aaPredicted RBP17.95■□□□□ 0.46
TPM1-208ENST00000404484 TAS2R8Q9NYW2 309 aa17.95■□□□□ 0.46
TPM1-208ENST00000404484 HCFC1P51610 2035 aa17.95■□□□□ 0.46
TPM1-208ENST00000404484 PLA2G10O15496 165 aa17.94■□□□□ 0.46
TPM1-208ENST00000404484 LYRM1O43325 122 aa17.94■□□□□ 0.46
TPM1-208ENST00000404484 LILRA1O75019 489 aa17.94■□□□□ 0.46
TPM1-208ENST00000404484 RBBP9O75884 186 aa17.94■□□□□ 0.46
TPM1-208ENST00000404484 HTR3BO95264 441 aa17.94■□□□□ 0.46
TPM1-208ENST00000404484 PLATP00750 562 aa17.94■□□□□ 0.46
TPM1-208ENST00000404484 DYRK1AQ13627 763 aa17.94■□□□□ 0.46
TPM1-208ENST00000404484 TMEM200AQ86VY9 491 aa17.94■□□□□ 0.46
TPM1-208ENST00000404484 WFDC8Q8IUA0 241 aa17.94■□□□□ 0.46
TPM1-208ENST00000404484 OR51F2Q8NH61 342 aa17.94■□□□□ 0.46
TPM1-208ENST00000404484 DEDD2Q8WXF8 326 aa17.94■□□□□ 0.46
TPM1-208ENST00000404484 MARVELD3Q96A59 401 aa17.94■□□□□ 0.46
TPM1-208ENST00000404484 ADAT1Q9BUB4 502 aaKnown RBP17.94■□□□□ 0.46
TPM1-208ENST00000404484 TMEM100Q9NV29 134 aa17.94■□□□□ 0.46
TPM1-208ENST00000404484 NKIRAS2Q9NYR9 191 aa17.94■□□□□ 0.46
TPM1-208ENST00000404484 MAST4O15021 2626 aa17.94■□□□□ 0.46
TPM1-208ENST00000404484 A0A1W2PP11 408 aa17.93■□□□□ 0.46
TPM1-208ENST00000404484 ANGPTL7O43827 346 aa17.93■□□□□ 0.46
TPM1-208ENST00000404484 LPLP06858 475 aa17.93■□□□□ 0.46
TPM1-208ENST00000404484 GSTP1P09211 210 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms