RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 BTBD10Q9BSF8 475 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 TBC1D23Q9NUY8 699 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 KLHDC2Q9Y2U9 406 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 CDH10Q9Y6N8 788 aa9.43□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ALDOBP05062 364 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 PGA5P0DJD9 388 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ZNF728P0DKX0 622 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 CFL1P23528 166 aaKnown RBP9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 SLC15A1P46059 708 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 LUMP51884 338 aaPredicted RBP9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 RPL23AP62750 156 aaKnown RBP9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 GNG3P63215 75 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 DGCR2P98153 550 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 DYNC1I2Q13409 638 aaKnown RBP9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 CEACAM21Q3KPI0 293 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 KRT77Q7Z794 578 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 CPLX4Q7Z7G2 160 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ZNF329Q86UD4 541 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 CALHM1Q8IU99 346 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 EGFL6Q8IUX8 553 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ERI1Q8IV48 349 aaKnown RBP9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ZNF561Q8N587 486 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OR4P4Q8NGL7 312 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OR13D1Q8NGV5 346 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OR6K6Q8NGW6 343 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OR6N2Q8NGY6 317 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 SIKE1Q9BRV8 207 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 RGCCQ9H4X1 137 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 HES4Q9HCC6 221 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 KRCC1Q9NPI7 259 aaPredicted RBP9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 IL20Q9NYY1 176 aa9.42□□□□□ -0.9
SPTLC1P3-201ENST00000403408 IGHV2-26A0A0B4J1V2 119 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 FAM183AA6NL82 134 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 F8VVB4 439 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 F8VWA3 439 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 K7N7A8 449 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 SLC22A2O15244 555 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ZNF737O75373 536 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 AZGP1P25311 298 aaKnown RBP9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 RRM2P31350 389 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OR12D2P58182 307 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ACTA2P62736 377 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ACTG2P63267 376 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ACTC1P68032 377 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ACTA1P68133 377 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 MAPRE2Q15555 327 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 UTF1Q5T230 341 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 GLYATQ6IB77 296 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OR2W3Q7Z3T1 314 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ARPINQ7Z6K5 226 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OR4X2Q8NGF9 303 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 DPF1Q92782 380 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 KCTD14Q9BQ13 255 aaPredicted RBP9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 NRIP2Q9BQI9 281 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 C1orf21Q9H246 121 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ABCB9Q9NP78 766 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 VNN3Q9NY84 501 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 RASL12Q9NYN1 266 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ABCD2Q9UBJ2 740 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OR14J1Q9UGF5 321 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 HHLA2Q9UM44 414 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 AP3M1Q9Y2T2 418 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 DNAH10Q8IVF4 4471 aa9.41□□□□□ -0.9
SPTLC1P3-201ENST00000403408 A0A1W2PPH5 198 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 TMEM82A0PJX8 343 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 PRR32B1ATL7 298 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 SLC1A7O00341 560 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 NOS1APO75052 506 aaPredicted RBP9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ZFPL1O95159 310 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 GASTP01350 101 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 RBP4P02753 201 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 H2BFMP0C1H6 154 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ERVK11-1P61568 191 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 MINOS1Q5TGZ0 78 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 MOB3CQ70IA8 216 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 TRPM8Q7Z2W7 1104 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OSR2Q8N2R0 312 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 TPRX1Q8N7U7 411 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 OR5A2Q8NGI9 324 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ZNF671Q8TAW3 534 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 RAX2Q96IS3 184 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 NOL4LQ96MY1 436 aaPredicted RBP9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 INTS14Q96SY0 518 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 SLC25A33Q9BSK2 321 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 TSSK6Q9BXA6 273 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 GPR61Q9BZJ8 451 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 LIN7BQ9HAP6 207 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 ARMC1Q9NVT9 282 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 MINOS1-NBL1R4GNA1 71 aa9.4□□□□□ -0.9
SPTLC1P3-201ENST00000403408 hCG_1809904A0A1W2PP81 198 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 A0A1W2PPE2 198 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 A0A1W2PR64 198 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 A0A1W2PRV1 198 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 SELENOFO60613 162 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 CLIC3O95833 236 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 IGLV3-1P01715 115 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 COX4I1P13073 169 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 GSTT1P30711 240 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 GDNFP39905 211 aa9.39□□□□□ -0.91
SPTLC1P3-201ENST00000403408 PPP1R8Q12972 351 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms