RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 SLC25A47Q6Q0C1 308 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 SLC16A14Q7RTX9 510 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 OR10Z1Q8NGY1 313 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 OR14K1Q8NGZ2 314 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 IFI44Q8TCB0 444 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 ISOC2Q96AB3 205 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 NAA11Q9BSU3 229 aaPredicted RBP11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 P4HTMQ9NXG6 502 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 FBXL17Q9UF56 701 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 AMDHD2Q9Y303 409 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 FBXO7Q9Y3I1 522 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 DOCK10Q96BY6 2186 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 A0A0J9YW62 118 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 A0A1B0GTQ1 180 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 TPPPO94811 219 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 ZNF728P0DKX0 622 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 EPHA1P21709 976 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 CARD18P57730 90 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 WDR74Q6RFH5 385 aaPredicted RBP11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 OPN5Q6U736 354 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 P4HA3Q7Z4N8 544 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 DTX1Q86Y01 620 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 MAML2Q8IZL2 1156 aaPredicted RBP11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 LYZL4Q96KX0 146 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 RTBDNQ9BSG5 229 aaPredicted RBP11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 METTL9Q9H1A3 318 aa11.1□□□□□ -0.63
PPP4R1-202ENST00000400555 RIF1Q5UIP0 2472 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 P04436 131 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 MUC1P15941 1255 aaPredicted RBP11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 ZNF17P17021 662 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 ZNF32P17041 273 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 FPR2P25090 351 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 PTGER4P35408 488 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 GGNBP1Q5YKI7 109 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 LYZL2Q7Z4W2 148 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 C14orf79Q96F83 325 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 NELFAQ9H3P2 528 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 C1orf123Q9NWV4 160 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 DHRS3O75911 302 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 OR5AC1P0C628 307 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 OR13C7P0DN81 318 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 CTRB1P17538 263 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 KCNJ3P48549 501 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 SUMO3P55854 103 aaPredicted RBP11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 TMEM33P57088 247 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 QRFPP83859 136 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 RIPPLY1Q0D2K3 151 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 PEA15Q15121 130 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 SHBQ15464 509 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 CTRB2Q6GPI1 263 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 OR9K2Q8NGE7 335 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 RTN4IP1Q8WWV3 396 aaPredicted RBP11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 RCL1Q9Y2P8 373 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 PRR14LQ5THK1 2151 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 CCDC187A0A096LP49 1063 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 LOC390937A0A1W2PQ73 354 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 MEX3AA1L020 520 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 ZNF16P17020 682 aaPredicted RBP11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 GDF1P27539 372 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 GNRHRP30968 328 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 EIF1P41567 113 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 LPAR6P43657 344 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 SUPT4H1P63272 117 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 CEACAM16Q2WEN9 425 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 PRSS54Q6PEW0 395 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 FBXW12Q6X9E4 464 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 SPEM1Q8N4L4 309 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 RAB33BQ9H082 229 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 UQCC1Q9NVA1 299 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 ST3GAL6Q9Y274 331 aa11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 UBE2J1Q9Y385 318 aaPredicted RBP11.09□□□□□ -0.63
PPP4R1-202ENST00000400555 AQP7P3A6NL99 342 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 SFTA3P0C7M3 94 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 ACKR3P25106 362 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 EMG1Q92979 244 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 PTX4Q96A99 478 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 ZC3H10Q96K80 434 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 MOB1AQ9H8S9 216 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 SNAPINO95295 136 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 OR8U9P0C7N5 309 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 ZNF345Q14585 488 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 PPA1Q15181 289 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 SLC25A26Q70HW3 274 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 FAM213BQ8TBF2 198 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 SGK3Q96BR1 496 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 RGCCQ9H4X1 137 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 AK3Q9UIJ7 227 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 SLC7A11Q9UPY5 501 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 HDGFL3Q9Y3E1 203 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 RNASEK-C17orf49H0YIS7 233 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 MFNGO00587 321 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 CD79AP11912 226 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 EDN3P14138 238 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 CALCRP30988 508 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 GLP1RP43220 463 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 ACTBL2Q562R1 376 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 KMT5CQ86Y97 462 aa11.08□□□□□ -0.64
PPP4R1-202ENST00000400555 A0A0G2JMM0 328 aa11.07□□□□□ -0.64
PPP4R1-202ENST00000400555 A0A1W2PPB8 328 aa11.07□□□□□ -0.64
PPP4R1-202ENST00000400555 A0A1W2PRS3 328 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms