RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 FIP1L1Q6UN15 594 aaKnown RBP6.32□□□□□ -1.4
USP16-204ENST00000399976 GCSAMQ8N6F7 178 aa6.32□□□□□ -1.4
USP16-204ENST00000399976 ZNF525Q8N782 197 aa6.32□□□□□ -1.4
USP16-204ENST00000399976 OR51A2Q8NGJ7 313 aa6.32□□□□□ -1.4
USP16-204ENST00000399976 GTF3AQ92664 365 aaKnown RBP6.32□□□□□ -1.4
USP16-204ENST00000399976 NRGNQ92686 78 aa6.32□□□□□ -1.4
USP16-204ENST00000399976 BORCS8Q96FH0 119 aa6.32□□□□□ -1.4
USP16-204ENST00000399976 MED30Q96HR3 178 aa6.32□□□□□ -1.4
USP16-204ENST00000399976 RNF170Q96K19 258 aa6.32□□□□□ -1.4
USP16-204ENST00000399976 NUDT16L1Q9BRJ7 211 aaKnown RBP6.32□□□□□ -1.4
USP16-204ENST00000399976 OR51B6Q9H340 312 aa6.32□□□□□ -1.4
USP16-204ENST00000399976 ZNF222Q9UK12 451 aa6.32□□□□□ -1.4
USP16-204ENST00000399976 FZR1Q9UM11 496 aa6.32□□□□□ -1.4
USP16-204ENST00000399976 WIPI2Q9Y4P8 454 aa6.32□□□□□ -1.4
USP16-204ENST00000399976 ABCA4P78363 2273 aa6.32□□□□□ -1.4
USP16-204ENST00000399976 UTP20O75691 2785 aaKnown RBP6.32□□□□□ -1.4
USP16-204ENST00000399976 ZNF732B4DXR9 585 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 H0YL77 283 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 PSMD9O00233 223 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 PDCD5O14737 125 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 SSX4O60224 188 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 FOXH1O75593 365 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 BPNT1O95861 308 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 CSN2P05814 226 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 OCM2P0CE71 109 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 SMIM18P0DKX4 95 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 COL8A2P25067 703 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 BDKRB2P30411 391 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 BPIFB3P59826 476 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 LMO4P61968 165 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 PPP3R1P63098 170 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 CCL8P80075 99 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 CD276Q5ZPR3 534 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 C1orf122Q6ZSJ8 110 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 MOB3CQ70IA8 216 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 OR2W3Q7Z3T1 314 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 COMMD2Q86X83 199 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 ZNF561Q8N587 486 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 TBC1D15Q8TC07 691 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 TSEN15Q8WW01 171 aaKnown RBP6.31□□□□□ -1.4
USP16-204ENST00000399976 PIGCQ92535 297 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 TMEM106AQ96A25 262 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 FGGYQ96C11 551 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 Q96MF0 132 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 OR5M11Q96RB7 305 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 COL12A1Q99715 3063 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 IGHV4-30-2A0A087WSY4 118 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 TRBV23-1A0A0A0MS06 115 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 PTGES3LE9PB15 166 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 MAGEB3O15480 346 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 CYB5AP00167 134 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 LIPFP07098 398 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 ERP29P30040 261 aaKnown RBP6.31□□□□□ -1.4
USP16-204ENST00000399976 PDZK1IP1Q13113 114 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 TMEM30BQ3MIR4 351 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 ASPHD2Q6ICH7 369 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 FAM166AQ6J272 317 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 ZNF788Q6ZQV5 615 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 LINC01356Q8N9X3 169 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 PNLDC1Q8NA58 520 aaKnown RBP6.31□□□□□ -1.4
USP16-204ENST00000399976 TSPAN14Q8NG11 270 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 NEIL1Q96FI4 390 aaPredicted RBP6.31□□□□□ -1.4
USP16-204ENST00000399976 PDCD1LG2Q9BQ51 273 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 ZNF665Q9H7R5 613 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 STUB1Q9UNE7 303 aa6.31□□□□□ -1.4
USP16-204ENST00000399976 DSCAML1Q8TD84 2053 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 B4DSR2 109 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.3□□□□□ -1.4
USP16-204ENST00000399976 MAGEB4O15481 346 aaPredicted RBP6.3□□□□□ -1.4
USP16-204ENST00000399976 WNT2P09544 360 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 CELP19835 753 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 MED22Q15528 200 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 MPV17LQ2QL34 196 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 ACP7Q6ZNF0 438 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 MOGAT3Q86VF5 341 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 OR10AD1Q8NGE0 317 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 OR51F2Q8NH61 342 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 CEP19Q96LK0 163 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 SLITRK2Q9H156 845 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 TMEM165Q9HC07 324 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 C1orf123Q9NWV4 160 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 TREM2Q9NZC2 230 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 GLS2Q9UI32 602 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 ADGRG4Q8IZF6 3080 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 NKX6-3A6NJ46 265 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 ZNF701M0R085 212 aaPredicted RBP6.3□□□□□ -1.4
USP16-204ENST00000399976 SIGLEC5O15389 551 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 EEF1B2P24534 225 aaKnown RBP6.3□□□□□ -1.4
USP16-204ENST00000399976 ALDH3B2P48448 385 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 SSX1Q16384 188 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 ARMCX4Q5H9R4 360 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 CYB5R2Q6BCY4 276 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 NLRC3Q7RTR2 1065 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 SLC36A1Q7Z2H8 476 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 LRRTM1Q86UE6 522 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 LY6G5BQ8NDX9 201 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 YIPF6Q96EC8 236 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 CMTM3Q96MX0 182 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 BRD7Q9NPI1 651 aa6.3□□□□□ -1.4
USP16-204ENST00000399976 SNTG1Q9NSN8 517 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms