RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ZNF774Q6NX45 483 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 SLC25A45Q8N413 288 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 OR52N4Q8NGI2 321 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 RFESDQ8TAC1 157 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 RXFP4Q8TDU9 374 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 PTPMT1Q8WUK0 201 aaPredicted RBP12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 PIK3IP1Q96FE7 263 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 DUS3LQ96G46 650 aaKnown RBP12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 TMPRSS13Q9BYE2 586 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 SLC6A13Q9NSD5 602 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 ZNF230Q9UIE0 474 aaPredicted RBP12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 GIPP09681 153 aaPredicted RBP12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 CD80P33681 288 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 BTG1P62324 171 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 CDC20Q12834 499 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 KIAA0141Q14154 515 aaPredicted RBP12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 AMER3Q8N944 861 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 RTN4IP1Q8WWV3 396 aaPredicted RBP12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 EID2BQ96D98 161 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 RSRP1Q9BUV0 290 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 CDCA4Q9BXL8 241 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 TGIF2Q9GZN2 237 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 SLC25A32Q9H2D1 315 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 RYDENQ9NUL5 291 aaKnown RBP12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 SHROOM3Q8TF72 1996 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 H7BYZ3 331 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 EML2O95834 649 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 KRASP01116 189 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 EPHA2P29317 976 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 PPP1CBP62140 327 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 GNPNAT1Q96EK6 184 aaPredicted RBP12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 PPP1R2P9O14990 202 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 ZNF883P0CG24 379 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 S100A4P26447 101 aaKnown RBP12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 AKR1C3P42330 323 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 SPINK9Q5DT21 86 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 RPUSD3Q6P087 351 aaKnown RBP12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 RIMKLAQ8IXN7 391 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 OR10Z1Q8NGY1 313 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 PSME4Q14997 1843 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 RER1O15258 196 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 PRSS12P56730 875 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 RAE1P78406 368 aaKnown RBP12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 DHODHQ02127 395 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 TPBGQ13641 420 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 TMPRSS11FQ6ZWK6 438 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 E5RGE8 158 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 ADAM20O43506 726 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 RRASP10301 218 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 H3F3AP84243 136 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 MAMSTRQ6ZN01 415 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 ACOT7LQ6ZUV0 252 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 NSG2Q9Y328 171 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 GREB1LQ9C091 1923 aaPredicted RBP12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 XKRY2A2RUG3 117 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 ARRDC5A6NEK1 342 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 ASB5Q8WWX0 329 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 LALBAP00709 142 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 IL5P05113 134 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 COX5AP20674 150 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 THBS4P35443 961 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 PABPC1L2AQ5JQF8 200 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 C11orf42Q8N5U0 333 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 OR13D1Q8NGV5 346 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 CIB3Q96Q77 187 aaPredicted RBP12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 ADGRL4Q9HBW9 690 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 KLK11Q9UBX7 282 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 A0A0G2JMZ2 1700 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 LRRC37A2A6NM11 1700 aa12.68□□□□□ -0.38
PCDHA11-201ENST00000398640 HSPB2A8KAH6 182 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 TAAR5O14804 337 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 OPRK1P41145 380 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 TMEM267Q0VDI3 215 aaPredicted RBP12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 HSPB2Q16082 182 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 FAM122BQ7Z309 247 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 SLC38A6Q8IZM9 456 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 RELL2Q8NC24 303 aaPredicted RBP12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 OR8B3Q8NGG8 313 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 OR13G1Q8NGZ3 307 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 OR8B2Q96RD0 313 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 INSL4Q14641 139 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 C4orf17Q53FE4 359 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 ADGRG7Q96K78 797 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 F2RL2O00254 374 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 SPNP16150 400 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 SP6Q3SY56 376 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 SSX7Q7RTT5 188 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 CTDSP1Q9GZU7 261 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 NAGKQ9UJ70 344 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 POMT1Q9Y6A1 747 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 FCGR3BO75015 233 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 LIMK1P53667 647 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 RHOBP62745 196 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 ICAM5Q9UMF0 924 aa12.67□□□□□ -0.38
PCDHA11-201ENST00000398640 TMPRSS2O15393 492 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 NGFP01138 241 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 THSD4Q6ZMP0 1018 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 GAL3ST2Q9H3Q3 398 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 CYC1P08574 325 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms