RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 SIGMAR1Q99720 223 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 ATF6BQ99941 703 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 C20orf144Q9BQM9 153 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 KCNK15Q9H427 330 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 UBQLN4Q9NRR5 601 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 GPR27Q9NS67 375 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 CBLN4Q9NTU7 201 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 A0A1W2PR80 420 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 HIDE1A8MVS5 230 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 WNT2P09544 360 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 LIMS3P0CW19 117 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 LIMS4P0CW20 117 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 MMP9P14780 707 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 PLP1P60201 277 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 PJVKQ0ZLH3 352 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 TEAD2Q15562 447 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 PRICKLE2Q7Z3G6 844 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 DTX1Q86Y01 620 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 DOLPP1Q86YN1 238 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 C1QL4Q86Z23 238 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 PRSS33Q8NF86 280 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 OR5D16Q8NGK9 328 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 SMAP2Q8WU79 429 aaPredicted RBP5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 JSRP1Q96MG2 331 aaPredicted RBP5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 EGLN3Q9H6Z9 239 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 SLC6A20Q9NP91 592 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 PILRBQ9UKJ0 227 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 ST3GAL6Q9Y274 331 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 SF3B6Q9Y3B4 125 aaKnown RBP5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 FEZF1A0PJY2 475 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 ANTXRLA6NF34 631 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 ZNF705EA8MWA4 302 aaPredicted RBP5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 C3orf80F5H4A9 247 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 NRG2O14511 850 aaPredicted RBP5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 CXADRP78310 365 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 HYAL1Q12794 435 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 JOSD1Q15040 202 aaPredicted RBP5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 C6orf226Q5I0X4 101 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 CXorf66Q5JRM2 361 aaPredicted RBP5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 LY6G5CQ5SRR4 150 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 HBMQ6B0K9 141 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 ASTLQ6HA08 431 aaPredicted RBP5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 FAM71F2Q6NXP2 309 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 B3GLCTQ6Y288 498 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 TMEM64Q6YI46 380 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 MORN4Q8NDC4 146 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 LFNGQ8NES3 379 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 OR2T33Q8NG76 320 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 OR4D11Q8NGI4 311 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 MRGPRX3Q96LB0 322 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 ZMAT4Q9H898 229 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 ELOVL5Q9NYP7 299 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 FRRS1LQ9P0K9 344 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 A0A087WUU8 490 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 A0A1B0GTI1 187 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 RPL36A-HNRNPH2H7BZ11 118 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 IFNA1P01562 189 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 TCF15Q12870 199 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 ZNF791Q3KP31 576 aaPredicted RBP5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 NRN1LQ496H8 165 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 WIPI1Q5MNZ9 446 aaPredicted RBP5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 OR4C11Q6IEV9 310 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 ZDHHC23Q8IYP9 409 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 ADGRF3Q8IZF5 1079 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 ARIH2OSQ8N7S6 290 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 ZNF614Q8N883 585 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 SDR9C7Q8NEX9 313 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 SPRYD4Q8WW59 207 aaPredicted RBP5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 OR8D1Q8WZ84 308 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 UPRTQ96BW1 309 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 FAM46AQ96IP4 442 aaKnown RBP5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 ACTR3CQ9C0K3 210 aaPredicted RBP5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 OR2J1Q9GZK6 312 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 GCM1Q9NP62 436 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 B3GALT5Q9Y2C3 310 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 CARHSP1Q9Y2V2 147 aaKnown RBP5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 LOC100289279A0A1B0GTE1 492 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 CPSF4LA6NMK7 179 aaKnown RBP5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 A8MVM7 634 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 NBR2O15453 112 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 FABP7O15540 132 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 GIPP09681 153 aaPredicted RBP5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 TBC1D3HP0C7X1 549 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 IL9P15248 144 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 UGT2B7P16662 529 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 HTR1FP30939 366 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 EIF5AP63241 154 aaKnown RBP5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 CRMP1Q14194 572 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 ELOA3BQ3SY89 546 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 PEAR1Q5VY43 1037 aaPredicted RBP5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.81□□□□□ -1.489e-7■■■■■ 49.6
TM9SF4-202ENST00000398022 WDR53Q7Z5U6 358 aaPredicted RBP5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 ELOA3Q8NG57 546 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 OR4S1Q8NGB4 309 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 OR10AD1Q8NGE0 317 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 OR5M3Q8NGP4 307 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 OR5AR1Q8NGP9 310 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 SLC35E1Q96K37 410 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 SOSTQ9BQB4 213 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 PLA2G12AQ9BZM1 189 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms