RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 BTNL8Q6UX41 500 aa10.1□□□□□ -0.79
TTC28-201ENST00000397906 ATAD5Q96QE3 1844 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 EPOPA6NHQ4 379 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 PXDC1Q5TGL8 231 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 ZNF416Q9BWM5 594 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 TXNDC12O95881 172 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 ZNF90Q03938 601 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 WDR38Q5JTN6 314 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 K7ESF4 209 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 RBM14Q96PK6 669 aaKnown RBP10.09□□□□□ -0.79
TTC28-201ENST00000397906 PCGF1Q9BSM1 259 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 ERRFI1Q9UJM3 462 aaPredicted RBP10.09□□□□□ -0.79
TTC28-201ENST00000397906 DCTN6O00399 190 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 ZNHIT1O43257 154 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 NAAAQ02083 359 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 GGTLC2Q14390 218 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 OR4E1P0C645 316 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 SFTPCP11686 197 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 AKR1C3P42330 323 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 CDCA4Q9BXL8 241 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 F5H697 171 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 PTHLHP12272 177 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 ZNF787Q6DD87 383 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 TTTY12Q9BZ98 90 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 SIGLEC7Q9Y286 467 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 XKRY2A2RUG3 117 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 CST7O76096 145 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 OR4A8P0C604 315 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 FAHD2BQ6P2I3 314 aaPredicted RBP10.09□□□□□ -0.79
TTC28-201ENST00000397906 TMEM171Q8WVE6 324 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 FAHD2AQ96GK7 314 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 SLC25A32Q9H2D1 315 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 HSPB2A8KAH6 182 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 METTL15P1P0C7V9 234 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 DDOSTP39656 456 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 DHODHQ02127 395 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 HSPB2Q16082 182 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 PMS2CLQ68D20 193 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 ZNF705AQ6ZN79 300 aaPredicted RBP10.09□□□□□ -0.79
TTC28-201ENST00000397906 D2HGDHQ8N465 521 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 UCN2Q96RP3 112 aa10.09□□□□□ -0.79
TTC28-201ENST00000397906 DUS4LO95620 317 aaKnown RBP10.08□□□□□ -0.8
TTC28-201ENST00000397906 PNLIPP16233 465 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 COL19A1Q14993 1142 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 C9orf172C9J069 976 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 HMGN3Q15651 99 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 LHX4Q969G2 390 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 PCOLCE2Q9UKZ9 415 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 TRAV38-1A0A0B4J264 116 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 CXorf51AA0A1B0GTR3 108 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 PTGFRP43088 359 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 SIPA1L3O60292 1781 aaPredicted RBP10.08□□□□□ -0.8
TTC28-201ENST00000397906 A0A1W2PQF6 199 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 NTF3P20783 257 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 CD82P27701 267 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 ETFDHQ16134 617 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 ISXQ2M1V0 245 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 SLC51BQ86UW2 128 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 PRR35P0CG20 571 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 COX5AP20674 150 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 LGALS7P47929 136 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 OR5M8Q8NGP6 311 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 TMED6Q8WW62 240 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 ASB10Q8WXI3 467 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 RASL11BQ9BPW5 248 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 AQP8O94778 261 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 IGHV4-34P06331 123 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 ZNF17P17021 662 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 RAC3P60763 192 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 GPNMBQ14956 572 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 CD226Q15762 336 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 TIGITQ495A1 244 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 RIMKLAQ8IXN7 391 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 TMEM147Q9BVK8 224 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 SULT1A3P0DMM9 295 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 SULT1A4P0DMN0 295 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 OR8B4Q96RC9 309 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 KCNMB2Q9Y691 235 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 NKX2-8O15522 239 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 CDKN2AP42771 156 aaKnown RBP10.08□□□□□ -0.8
TTC28-201ENST00000397906 SKP2Q13309 424 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 PRSS42Q7Z5A4 293 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 TGIF2LXQ8IUE1 241 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 TINAGQ9UJW2 476 aa10.08□□□□□ -0.8
TTC28-201ENST00000397906 E5RGE8 158 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 EPXP11678 715 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 UCNP55089 124 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 NSG2Q9Y328 171 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 ABCA3Q99758 1704 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 TMEM272A0A1B0GTI8 110 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 B3GALNT1O75752 331 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 ACTL6AO96019 429 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 HRASP01112 189 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 ARRDC5A6NEK1 342 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 ZNF683Q8IZ20 524 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 SERPINE3A8MV23 424 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 FLRT3Q9NZU0 649 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 FOCADQ5VW36 1801 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 THSD7AQ9UPZ6 1657 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 OR3A1P47881 315 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms