RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 MPZP25189 248 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 SRP9P49458 86 aaKnown RBP11.93□□□□□ -0.5
GAPDH-203ENST00000396858 PPOXP50336 477 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 EFNB2P52799 333 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 CCL8P80075 99 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 HOXA4Q00056 320 aaPredicted RBP11.93□□□□□ -0.5
GAPDH-203ENST00000396858 MZT1Q08AG7 82 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 UNC119Q13432 240 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 SLC22A6Q4U2R8 563 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 AGAP6Q5VW22 663 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 MOGAT3Q86VF5 341 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 TBC1D15Q8TC07 691 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 AQP3Q92482 292 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 GAL3ST1Q99999 423 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 PKIBQ9C010 78 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 TLNRD1Q9H1K6 362 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 MIXL1Q9H2W2 232 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 C1orf123Q9NWV4 160 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 LAMP3Q9UQV4 416 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 ETV7Q9Y603 341 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 A3GALT2U3KPV4 340 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 ICE1Q9Y2F5 2266 aa11.93□□□□□ -0.5
GAPDH-203ENST00000396858 hCG_1807616A0A1W2PRN6 198 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 CDIPTO14735 213 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 CRTAPO75718 401 aaPredicted RBP11.92□□□□□ -0.5
GAPDH-203ENST00000396858 MPIG6BO95866 241 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 CD55P08174 381 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 ADH4P08319 380 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 UBBP0CG47 229 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 BCL3P20749 454 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 BMXP51813 675 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 GMFBP60983 142 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 IL24Q13007 206 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 MADCAM1Q13477 382 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 RSU1Q15404 277 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 TESK1Q15569 626 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 HIST2H2BCQ6DN03 193 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 MZT2AQ6P582 158 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 ZNF295-AS1Q8N0V1 137 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 TMEM104Q8NE00 496 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 OR51F2Q8NH61 342 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 PSMG3-AS1Q96PY0 264 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 DIRC2Q96SL1 478 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 S100A13Q99584 98 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 VRK1Q99986 396 aaPredicted RBP11.92□□□□□ -0.5
GAPDH-203ENST00000396858 CACNG6Q9BXT2 260 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 METTL9Q9H1A3 318 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 MMP27Q9H306 513 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 BANF2Q9H503 90 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 SAP30LQ9HAJ7 183 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 RBFOX1Q9NWB1 397 aaKnown RBP11.92□□□□□ -0.5
GAPDH-203ENST00000396858 RHBDL2Q9NX52 303 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 SPATA2Q9UM82 520 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 POLDIP2Q9Y2S7 368 aa11.92□□□□□ -0.5
GAPDH-203ENST00000396858 GCN1Q92616 2671 aaKnown RBP11.92□□□□□ -0.5
GAPDH-203ENST00000396858 DOPEY2Q9Y3R5 2298 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 TMEM14DPA8MWL7 114 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 LDLRAD4O15165 306 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 CDC14BO60729 498 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 TMEM127O75204 238 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 HTR3BO95264 441 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 PTBP3O95758 552 aaKnown RBP11.91□□□□□ -0.5
GAPDH-203ENST00000396858 CYB5AP00167 134 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 SFTPBP07988 381 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 CDKN1AP38936 164 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 NPBWR2P48146 333 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 SNU13P55769 128 aaKnown RBP11.91□□□□□ -0.5
GAPDH-203ENST00000396858 QRFPP83859 136 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 DYNC1I2Q13409 638 aaKnown RBP11.91□□□□□ -0.5
GAPDH-203ENST00000396858 PCGF3Q3KNV8 242 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 C2orf76Q3KRA6 126 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 FAM76BQ5HYJ3 339 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 FAM209AQ5JX71 171 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 UBE2NLQ5JXB2 153 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 METAP1DQ6UB28 335 aaPredicted RBP11.91□□□□□ -0.5
GAPDH-203ENST00000396858 WDR82Q6UXN9 313 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 OR2W3Q7Z3T1 314 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 TGIF2LYQ8IUE0 185 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 C11orf53Q8IXP5 236 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 CELF2-AS1Q8N7Q2 184 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 ZSCAN4Q8NAM6 433 aaPredicted RBP11.91□□□□□ -0.5
GAPDH-203ENST00000396858 PXT1Q8NFP0 134 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 OR6Q1Q8NGQ2 317 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 CEP19Q96LK0 163 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 MRI1Q9BV20 369 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 TMEM59Q9BXS4 323 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 PLEKHF2Q9H8W4 249 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 FN3KRPQ9HA64 309 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 TREM2Q9NZC2 230 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 MTCH1Q9NZJ7 389 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 IL36RNQ9UBH0 155 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 IL19Q9UHD0 177 aa11.91□□□□□ -0.5
GAPDH-203ENST00000396858 FAM25AB3EWG3 89 aa11.9□□□□□ -0.5
GAPDH-203ENST00000396858 FAM25CB3EWG5 89 aa11.9□□□□□ -0.5
GAPDH-203ENST00000396858 FAM25GB3EWG6 89 aa11.9□□□□□ -0.5
GAPDH-203ENST00000396858 F8VVB4 439 aa11.9□□□□□ -0.5
GAPDH-203ENST00000396858 F8VWA3 439 aa11.9□□□□□ -0.5
GAPDH-203ENST00000396858 TRAPPC2LH3BP13 241 aa11.9□□□□□ -0.5
GAPDH-203ENST00000396858 KDM4BO94953 1096 aa11.9□□□□□ -0.5
GAPDH-203ENST00000396858 PGA5P0DJD9 388 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms