RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 NUDCD2Q8WVJ2 157 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 ATP5SQ99766 215 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 TMEM231Q9H6L2 316 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 GP6Q9HCN6 339 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 MOSPD3O75425 235 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 GCSHP23434 173 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 F2RP25116 425 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 ZNF770Q6IQ21 691 aaPredicted RBP13.9□□□□□ -0.18
GNE-202ENST00000396594 ADAM5Q6NVV9 412 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 LYPD8Q6UX82 237 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 UQCC1Q9NVA1 299 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 WDR90Q96KV7 1748 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 NRXN2Q9P2S2 1712 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 CDC14BO60729 498 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 LIFP15018 202 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 CPN1P15169 458 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 GZMKP49863 264 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 EFSO43281 561 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 SSSCA1O60232 199 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 MGST1P10620 155 aaKnown RBP13.9□□□□□ -0.18
GNE-202ENST00000396594 DUSP2Q05923 314 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 OR2M3Q8NG83 312 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 MARCH1Q8TCQ1 289 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 FAM234AQ9H0X4 552 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 NAA60Q9H7X0 242 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 GNG13Q9P2W3 67 aa13.9□□□□□ -0.18
GNE-202ENST00000396594 ZFP92A6NM28 416 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 CHEK1O14757 476 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 LANCL1O43813 399 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 IGFBP1P08833 259 aaPredicted RBP13.89□□□□□ -0.19
GNE-202ENST00000396594 IL9P15248 144 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 CTF1Q16619 201 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 PHYHD1Q5SRE7 291 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 C11orf87Q6NUJ2 197 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 TMEM182Q6ZP80 229 aaPredicted RBP13.89□□□□□ -0.19
GNE-202ENST00000396594 MRGPREQ86SM8 312 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 OR2Z1Q8NG97 314 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 ZNF416Q9BWM5 594 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 ISG20L2Q9H9L3 353 aaKnown RBP13.89□□□□□ -0.19
GNE-202ENST00000396594 ADRB1P08588 477 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 CCDC144NLQ6NUI1 221 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 OR4F17Q8NGA8 305 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 OR4F5Q8NH21 305 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 EID2BQ96D98 161 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 OR4F4Q96R69 305 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 FBXO34Q9NWN3 711 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 A0A1W2PPV9 198 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 AHRRA9YTQ3 701 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 DUS4LO95620 317 aaKnown RBP13.89□□□□□ -0.19
GNE-202ENST00000396594 RAB5AP20339 215 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 IL24Q13007 206 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 C4orf17Q53FE4 359 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 ZNF468Q5VIY5 522 aaPredicted RBP13.89□□□□□ -0.19
GNE-202ENST00000396594 OR5AP2Q8NGF4 316 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 BSCL2Q96G97 398 aaPredicted RBP13.89□□□□□ -0.19
GNE-202ENST00000396594 IGHV3-15A0A0B4J1V0 119 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 TMEM272A0A1B0GTI8 110 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 HMSDA8MTL9 139 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 TXNDC12O95881 172 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 BGLAPP02818 100 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 ASCL1P50553 236 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 MTCH1Q9NZJ7 389 aa13.89□□□□□ -0.19
GNE-202ENST00000396594 OR2M5A3KFT3 312 aa13.88□□□□□ -0.19
GNE-202ENST00000396594 CRHP06850 196 aa13.88□□□□□ -0.19
GNE-202ENST00000396594 RPUSD4Q96CM3 377 aaKnown RBP13.88□□□□□ -0.19
GNE-202ENST00000396594 TMEM147Q9BVK8 224 aa13.88□□□□□ -0.19
GNE-202ENST00000396594 CCL27Q9Y4X3 112 aa13.88□□□□□ -0.19
GNE-202ENST00000396594 ANKRD31Q8N7Z5 1873 aa13.88□□□□□ -0.19
GNE-202ENST00000396594 RANP62826 216 aaKnown RBP13.88□□□□□ -0.19
GNE-202ENST00000396594 RPS4Y2Q8TD47 263 aa13.88□□□□□ -0.19
GNE-202ENST00000396594 CALCRP30988 508 aa13.88□□□□□ -0.19
GNE-202ENST00000396594 CRYBB2P43320 205 aa13.88□□□□□ -0.19
GNE-202ENST00000396594 SCARF2Q96GP6 870 aaPredicted RBP13.88□□□□□ -0.19
GNE-202ENST00000396594 ZMAT3Q9HA38 289 aaKnown RBP13.88□□□□□ -0.19
GNE-202ENST00000396594 SLC35D1Q9NTN3 355 aa13.88□□□□□ -0.19
GNE-202ENST00000396594 FOXD3Q9UJU5 478 aaPredicted RBP13.88□□□□□ -0.19
GNE-202ENST00000396594 LSM2Q9Y333 95 aaKnown RBP13.88□□□□□ -0.19
GNE-202ENST00000396594 SLC25A42Q86VD7 318 aa13.88□□□□□ -0.19
GNE-202ENST00000396594 SUMF1Q8NBK3 374 aa13.88□□□□□ -0.19
GNE-202ENST00000396594 RPH3ALQ9UNE2 315 aa13.88□□□□□ -0.19
GNE-202ENST00000396594 A0A1W2PQF6 199 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 DHRS7CA6NNS2 312 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 MMP16P51512 607 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 PSG6Q00889 435 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 GAB4Q2WGN9 574 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 DNASE2BQ8WZ79 361 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 TVP23CQ96ET8 276 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 GPX7Q96SL4 187 aaPredicted RBP13.87□□□□□ -0.19
GNE-202ENST00000396594 NKX6-2Q9C056 277 aaPredicted RBP13.87□□□□□ -0.19
GNE-202ENST00000396594 RNF7Q9UBF6 113 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 RCL1Q9Y2P8 373 aaKnown RBP13.87□□□□□ -0.19
GNE-202ENST00000396594 MICAL3Q7RTP6 2002 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 NPIPB13A6NJU9 1138 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 ZNF727A8MUV8 499 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 TRDCB7Z8K6 153 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 NPIPB4C9JG80 1138 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 CTAG2O75638 210 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 COX5BP10606 129 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 RHOUQ7L0Q8 258 aa13.87□□□□□ -0.19
GNE-202ENST00000396594 RNF133Q8WVZ7 376 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms