RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 ZNF57Q68EA5 555 aaPredicted RBP17.33■□□□□ 0.37
HDDC3-202ENST00000394272 SLC25A26Q70HW3 274 aa17.33■□□□□ 0.37
HDDC3-202ENST00000394272 GALNT11Q8NCW6 608 aa17.33■□□□□ 0.37
HDDC3-202ENST00000394272 OR51F2Q8NH61 342 aa17.33■□□□□ 0.37
HDDC3-202ENST00000394272 AQP3Q92482 292 aa17.33■□□□□ 0.37
HDDC3-202ENST00000394272 KLK11Q9UBX7 282 aa17.33■□□□□ 0.37
HDDC3-202ENST00000394272 NKX2-6A6NCS4 301 aa17.33■□□□□ 0.36
HDDC3-202ENST00000394272 DPRXA6NFQ7 191 aa17.33■□□□□ 0.36
HDDC3-202ENST00000394272 FOXI3A8MTJ6 420 aaPredicted RBP17.33■□□□□ 0.36
HDDC3-202ENST00000394272 SFTPBP07988 381 aa17.33■□□□□ 0.36
HDDC3-202ENST00000394272 SRP9P49458 86 aaKnown RBP17.33■□□□□ 0.36
HDDC3-202ENST00000394272 SAXO1Q8IYX7 474 aa17.33■□□□□ 0.36
HDDC3-202ENST00000394272 OR56B1Q8NGI3 324 aa17.33■□□□□ 0.36
HDDC3-202ENST00000394272 OR8S1Q8NH09 359 aa17.33■□□□□ 0.36
HDDC3-202ENST00000394272 TMEM171Q8WVE6 324 aa17.33■□□□□ 0.36
HDDC3-202ENST00000394272 Q96M66 194 aa17.33■□□□□ 0.36
HDDC3-202ENST00000394272 MICU1Q9BPX6 476 aa17.33■□□□□ 0.36
HDDC3-202ENST00000394272 ADAT1Q9BUB4 502 aaKnown RBP17.33■□□□□ 0.36
HDDC3-202ENST00000394272 SELENOIQ9C0D9 397 aa17.33■□□□□ 0.36
HDDC3-202ENST00000394272 CFAP46Q8IYW2 2715 aa17.32■□□□□ 0.36
HDDC3-202ENST00000394272 A0A1B0GWJ7 208 aa17.32■□□□□ 0.36
HDDC3-202ENST00000394272 SOCS1O15524 211 aa17.32■□□□□ 0.36
HDDC3-202ENST00000394272 TIMM8AO60220 97 aaPredicted RBP17.32■□□□□ 0.36
HDDC3-202ENST00000394272 HTR3BO95264 441 aa17.32■□□□□ 0.36
HDDC3-202ENST00000394272 CSTBP04080 98 aaKnown RBP17.32■□□□□ 0.36
HDDC3-202ENST00000394272 GTF2F2P13984 249 aa17.32■□□□□ 0.36
HDDC3-202ENST00000394272 PRSS3P35030 304 aa17.32■□□□□ 0.36
HDDC3-202ENST00000394272 TMEM50BP56557 158 aa17.32■□□□□ 0.36
HDDC3-202ENST00000394272 NRARPQ7Z6K4 114 aa17.32■□□□□ 0.36
HDDC3-202ENST00000394272 TMEM200AQ86VY9 491 aa17.32■□□□□ 0.36
HDDC3-202ENST00000394272 ZNF573Q86YE8 665 aa17.32■□□□□ 0.36
HDDC3-202ENST00000394272 Q8NFD4 153 aa17.32■□□□□ 0.36
HDDC3-202ENST00000394272 OR51T1Q8NGJ9 327 aa17.32■□□□□ 0.36
HDDC3-202ENST00000394272 RTL8AQ9BWD3 113 aa17.32■□□□□ 0.36
HDDC3-202ENST00000394272 OR51I2Q9H344 312 aa17.32■□□□□ 0.36
HDDC3-202ENST00000394272 ZMAT3Q9HA38 289 aaKnown RBP17.32■□□□□ 0.36
HDDC3-202ENST00000394272 TMEM100Q9NV29 134 aa17.32■□□□□ 0.36
HDDC3-202ENST00000394272 H7C417 338 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 SULT1C2O00338 296 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 MLNRO43193 412 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 LYRM1O43325 122 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 MELTFP08582 738 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 CPT2P23786 658 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 UQCRFS1P47985 274 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 GUCA2AQ02747 115 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 KLF9Q13886 244 aaPredicted RBP17.31■□□□□ 0.36
HDDC3-202ENST00000394272 IGFBP7Q16270 282 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 PLAC9Q5JTB6 97 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 WDR86Q86TI4 376 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 TOMM5Q8N4H5 51 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 NUP37Q8NFH4 326 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 PRR7Q8TB68 274 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 GPX8Q8TED1 209 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 CA5BP1Q8WTZ4 195 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 MRPS24Q96EL2 167 aaKnown RBP17.31■□□□□ 0.36
HDDC3-202ENST00000394272 RADILQ96JH8 1075 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 SLC22A4Q9H015 551 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 MTFP1Q9UDX5 166 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 ELF5Q9UKW6 265 aaPredicted RBP17.31■□□□□ 0.36
HDDC3-202ENST00000394272 TMEM235A6NFC5 223 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 IGHV3-13P01766 116 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 SPNP16150 400 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 MPZP25189 248 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 RPS23P62266 143 aaKnown RBP17.31■□□□□ 0.36
HDDC3-202ENST00000394272 BSPH1Q075Z2 132 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 HAGHLQ6PII5 290 aaPredicted RBP17.31■□□□□ 0.36
HDDC3-202ENST00000394272 Q6ZR03 302 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 Q6ZTK2 550 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 RTN4RL2Q86UN3 420 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 LRP11Q86VZ4 500 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 CHST4Q8NCG5 386 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 SEH1LQ96EE3 360 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 COX4I2Q96KJ9 171 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 SCPEP1Q9HB40 452 aa17.31■□□□□ 0.36
HDDC3-202ENST00000394272 IGLV3-9A0A075B6K5 115 aa17.3■□□□□ 0.36
HDDC3-202ENST00000394272 H0YL77 283 aa17.3■□□□□ 0.36
HDDC3-202ENST00000394272 ABCD4O14678 606 aa17.3■□□□□ 0.36
HDDC3-202ENST00000394272 GNB3P16520 340 aa17.3■□□□□ 0.36
HDDC3-202ENST00000394272 GNLYP22749 145 aa17.3■□□□□ 0.36
HDDC3-202ENST00000394272 GRNP28799 593 aaKnown RBP17.3■□□□□ 0.36
HDDC3-202ENST00000394272 NPBWR2P48146 333 aa17.3■□□□□ 0.36
HDDC3-202ENST00000394272 TLE1Q04724 770 aa17.3■□□□□ 0.36
HDDC3-202ENST00000394272 OR8G1Q15617 311 aa17.3■□□□□ 0.36
HDDC3-202ENST00000394272 CDNFQ49AH0 187 aa17.3■□□□□ 0.36
HDDC3-202ENST00000394272 C4orf17Q53FE4 359 aa17.3■□□□□ 0.36
HDDC3-202ENST00000394272 MKXQ8IYA7 352 aa17.3■□□□□ 0.36
HDDC3-202ENST00000394272 PIAS4Q8N2W9 510 aaPredicted RBP17.3■□□□□ 0.36
HDDC3-202ENST00000394272 RAB3CQ96E17 227 aa17.3■□□□□ 0.36
HDDC3-202ENST00000394272 PKIBQ9C010 78 aa17.3■□□□□ 0.36
HDDC3-202ENST00000394272 NGBQ9NPG2 151 aa17.3■□□□□ 0.36
HDDC3-202ENST00000394272 PCDHB16Q9NRJ7 776 aa17.3■□□□□ 0.36
HDDC3-202ENST00000394272 MTCH1Q9NZJ7 389 aa17.3■□□□□ 0.36
HDDC3-202ENST00000394272 ICE1Q9Y2F5 2266 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 HCFC1P51610 2035 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 SYNGR1O43759 233 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 LPLP06858 475 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 HIST1H1DP16402 221 aaKnown RBP17.29■□□□□ 0.36
HDDC3-202ENST00000394272 SORDQ00796 357 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 ELP2Q6IA86 826 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 OSR2Q8N2R0 312 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms