RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 WNT5BQ9H1J7 359 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 C5orf66Q9H5L9 145 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 OPA3Q9H6K4 179 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 CHMP1AQ9HD42 196 aaPredicted RBP6.26□□□□□ -1.41
SMAD1-202ENST00000394092 FOXJ2Q9P0K8 574 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 OSGIN2Q9Y236 505 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 KLF13Q9Y2Y9 288 aaPredicted RBP6.26□□□□□ -1.41
SMAD1-202ENST00000394092 ZNF724A8MTY0 619 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 KRBOX1C9JBD0 128 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 KLRC4-KLRK1H3BQV0 150 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 RPL36A-HNRNPH2H7BZ11 118 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 TERTO14746 1132 aaKnown RBP6.26□□□□□ -1.41
SMAD1-202ENST00000394092 ZNF708P17019 499 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 M6PRP20645 277 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 ZP3P21754 424 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 ACKR3P25106 362 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 PSMB6P28072 239 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 AVPR2P30518 371 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 SERPINF1P36955 418 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 RBMXP38159 391 aaKnown RBP6.26□□□□□ -1.41
SMAD1-202ENST00000394092 LHX2P50458 406 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 BAMBIQ13145 260 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 CAMK2BQ13554 666 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 RNPS1Q15287 305 aaKnown RBP6.26□□□□□ -1.41
SMAD1-202ENST00000394092 LRRC37A5PQ49AS3 106 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 NKAPLQ5M9Q1 402 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 PLCXD3Q63HM9 321 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 ZNF660Q6AZW8 331 aaPredicted RBP6.26□□□□□ -1.41
SMAD1-202ENST00000394092 SPINK14Q6IE38 97 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 CLEC18BQ6UXF7 455 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 ASCL4Q6XD76 172 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 OVCH2Q7RTZ1 564 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 C1QL2Q7Z5L3 287 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 HSD17B13Q7Z5P4 300 aaPredicted RBP6.26□□□□□ -1.41
SMAD1-202ENST00000394092 DPPA2Q7Z7J5 298 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 OSR2Q8N2R0 312 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 OR13G1Q8NGZ3 307 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 SPSB4Q96A44 273 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 ARPC5LQ9BPX5 153 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 SLX1AQ9BQ83 275 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 C1QTNF5Q9BXJ0 243 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 TTTY12Q9BZ98 90 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 PRRG4Q9BZD6 226 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 FN3KRPQ9HA64 309 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 BCO1Q9HAY6 547 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 NECAP2Q9NVZ3 263 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 SDHAF2Q9NX18 166 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 ZNF230Q9UIE0 474 aaPredicted RBP6.26□□□□□ -1.41
SMAD1-202ENST00000394092 ARHGAP21Q5T5U3 1957 aa6.26□□□□□ -1.41
SMAD1-202ENST00000394092 TNRC6AQ8NDV7 1962 aaKnown RBP6.26□□□□□ -1.41
SMAD1-202ENST00000394092 PMS2P1A4D2B8 440 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 RNF222A6NCQ9 220 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 FAM90A10PA6NDY2 464 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 FAM90A18PA6NE21 464 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 FAM90A16PA6NEW6 464 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 FAM90A20PA6NIJ5 464 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 FAM90A8PA6NJQ4 464 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 FAM90A7PA6NKC0 464 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 FAM90A22PA8MWA6 464 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 FAM90A12PA8MX19 464 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 FAM90A5PA8MXJ8 464 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 FAM90A23PA8MXZ1 464 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 EEF1E1-BLOC1S5C9J1V9 151 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 TPD52L2O43399 206 aaKnown RBP6.25□□□□□ -1.41
SMAD1-202ENST00000394092 CTSDP07339 412 aaPredicted RBP6.25□□□□□ -1.41
SMAD1-202ENST00000394092 MMP7P09237 267 aaPredicted RBP6.25□□□□□ -1.41
SMAD1-202ENST00000394092 FAM90A15PP0C7V4 464 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 FAM90A13PP0C7W8 464 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 FAM90A14PP0C7W9 464 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 FAM90A24PP0C7X0 464 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 NTF4P34130 210 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 PMELP40967 661 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 CLDN18P56856 261 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 FAM3AP98173 230 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 MALLQ13021 153 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 PABPC1L2AQ5JQF8 200 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 TSPO2Q5TGU0 170 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 AADACL3Q5VUY0 350 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 RGS7BPQ6MZT1 257 aaPredicted RBP6.25□□□□□ -1.41
SMAD1-202ENST00000394092 RPUSD3Q6P087 351 aaKnown RBP6.25□□□□□ -1.41
SMAD1-202ENST00000394092 C6orf201Q7Z4U5 140 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 RTN4RL2Q86UN3 420 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 SGPP2Q8IWX5 399 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 MCEMP1Q8IX19 187 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 SKA3Q8IX90 412 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 CCDC36Q8IYA8 594 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 EIF4E3Q8N5X7 224 aaKnown RBP6.25□□□□□ -1.41
SMAD1-202ENST00000394092 ZSCAN4Q8NAM6 433 aaPredicted RBP6.25□□□□□ -1.41
SMAD1-202ENST00000394092 SUN5Q8TC36 379 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 ADAMTS17Q8TE56 1095 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 PCNPQ8WW12 178 aaKnown RBP6.25□□□□□ -1.41
SMAD1-202ENST00000394092 DCUN1D4Q92564 292 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 TMEM230Q96A57 120 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 ZNF845Q96IR2 970 aaPredicted RBP6.25□□□□□ -1.41
SMAD1-202ENST00000394092 SEC22AQ96IW7 307 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 SIGLEC12Q96PQ1 595 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 CMSS1Q9BQ75 279 aaKnown RBP6.25□□□□□ -1.41
SMAD1-202ENST00000394092 ZNF471Q9BX82 626 aaPredicted RBP6.25□□□□□ -1.41
SMAD1-202ENST00000394092 TMEM9BQ9NQ34 198 aa6.25□□□□□ -1.41
SMAD1-202ENST00000394092 C1orf123Q9NWV4 160 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms