RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 LMO1P25800 156 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 LSM6P62312 80 aaKnown RBP9.81□□□□□ -0.84
CUX1-204ENST00000393824 SUPT4H1P63272 117 aaKnown RBP9.81□□□□□ -0.84
CUX1-204ENST00000393824 GABREP78334 506 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 ROM1Q03395 351 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 RSU1Q15404 277 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 SURF2Q15527 256 aaPredicted RBP9.81□□□□□ -0.84
CUX1-204ENST00000393824 DCAF12Q5T6F0 453 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 OPN5Q6U736 354 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 NPSR1Q6W5P4 371 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 LRRC69Q6ZNQ3 347 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 MED25Q71SY5 747 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 OR51A2Q8NGJ7 313 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 OR10J5Q8NHC4 309 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 NUDT16L1Q9BRJ7 211 aaKnown RBP9.81□□□□□ -0.84
CUX1-204ENST00000393824 EIF5A2Q9GZV4 153 aaKnown RBP9.81□□□□□ -0.84
CUX1-204ENST00000393824 SMDT1Q9H4I9 107 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 DLL3Q9NYJ7 618 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 AMDHD2Q9Y303 409 aa9.81□□□□□ -0.84
CUX1-204ENST00000393824 A0A1B0GW64 132 aa9.8□□□□□ -0.84
CUX1-204ENST00000393824 MKRN2OSH3BPM6 223 aa9.8□□□□□ -0.84
CUX1-204ENST00000393824 DDAH2O95865 285 aa9.8□□□□□ -0.84
CUX1-204ENST00000393824 UMODP07911 640 aa9.8□□□□□ -0.84
CUX1-204ENST00000393824 BIKQ13323 160 aa9.8□□□□□ -0.84
CUX1-204ENST00000393824 MESTQ5EB52 335 aa9.8□□□□□ -0.84
CUX1-204ENST00000393824 VAX1Q5SQQ9 334 aa9.8□□□□□ -0.84
CUX1-204ENST00000393824 OR2A2Q6IF42 318 aa9.8□□□□□ -0.84
CUX1-204ENST00000393824 JAGN1Q8N5M9 183 aa9.8□□□□□ -0.84
CUX1-204ENST00000393824 NKAIN3Q8N8D7 197 aa9.8□□□□□ -0.84
CUX1-204ENST00000393824 ZNF610Q8N9Z0 462 aa9.8□□□□□ -0.84
CUX1-204ENST00000393824 PPP1R14AQ96A00 147 aa9.8□□□□□ -0.84
CUX1-204ENST00000393824 FAM46BQ96A09 425 aa9.8□□□□□ -0.84
CUX1-204ENST00000393824 DGAT2Q96PD7 388 aa9.8□□□□□ -0.84
CUX1-204ENST00000393824 STRADBQ9C0K7 418 aa9.8□□□□□ -0.84
CUX1-204ENST00000393824 OR8D2Q9GZM6 311 aa9.8□□□□□ -0.84
CUX1-204ENST00000393824 OPN3Q9H1Y3 402 aaPredicted RBP9.8□□□□□ -0.84
CUX1-204ENST00000393824 UNKLQ9H9P5 680 aaKnown RBP9.8□□□□□ -0.84
CUX1-204ENST00000393824 NCOR2Q9Y618 2525 aa9.8□□□□□ -0.84
CUX1-204ENST00000393824 PRRC2CQ9Y520 2896 aaKnown RBP9.8□□□□□ -0.84
CUX1-204ENST00000393824 ZNF724A8MTY0 619 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 SCGNO76038 276 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 SEC11BP0C7V7 166 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 RPL12P30050 165 aaKnown RBP9.79□□□□□ -0.84
CUX1-204ENST00000393824 GNG10P50151 68 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 SUCLG1P53597 346 aaKnown RBP9.79□□□□□ -0.84
CUX1-204ENST00000393824 CLINT1Q14677 625 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 ANKRD55Q3KP44 614 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 UNQ6494/PRO21346Q6UXR6 183 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 C16orf47Q6ZP98 133 aaPredicted RBP9.79□□□□□ -0.84
CUX1-204ENST00000393824 PEG10Q86TG7 708 aaKnown RBP9.79□□□□□ -0.84
CUX1-204ENST00000393824 HIST3H2BBQ8N257 126 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 C10orf53Q8N6V4 93 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 OR4D6Q8NGJ1 314 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 OR4K15Q8NH41 348 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 C16orf52Q8NHV5 167 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 SCGB3A2Q96PL1 93 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 TSPAN32Q96QS1 320 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 LPAR4Q99677 370 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 CNTNAP3Q9BZ76 1288 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 RIMS4Q9H426 269 aaPredicted RBP9.79□□□□□ -0.84
CUX1-204ENST00000393824 METTL8Q9H825 291 aaKnown RBP9.79□□□□□ -0.84
CUX1-204ENST00000393824 MEMO1Q9Y316 297 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 CNTRLQ7Z7A1 2325 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 CCDC187A0A096LP49 1063 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 GFRA3O60609 400 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 ZNF354AO60765 605 aaPredicted RBP9.79□□□□□ -0.84
CUX1-204ENST00000393824 HIST1H2BKO60814 126 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 TNFSF15O95150 251 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 ONECUT2O95948 504 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 PMP2P02689 132 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 HIST1H2BJP06899 126 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 ZNF708P17019 499 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 HIST1H2BOP23527 126 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 HIST1H2BBP33778 126 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 HIST1H2BDP58876 126 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 HIST1H2BCP62807 126 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 NHLH2Q02577 135 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 RPL18Q07020 188 aaKnown RBP9.79□□□□□ -0.84
CUX1-204ENST00000393824 SLC9A3R2Q15599 337 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 USF2Q15853 346 aaPredicted RBP9.79□□□□□ -0.84
CUX1-204ENST00000393824 HIST2H2BEQ16778 126 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.79□□□□□ -0.84
CUX1-204ENST00000393824 HIST2H3PS2Q5TEC6 136 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 FNDC7Q5VTL7 733 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 SLC18B1Q6NT16 456 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 KCTD18Q6PI47 426 aaPredicted RBP9.79□□□□□ -0.84
CUX1-204ENST00000393824 CATSPERDQ86XM0 798 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 LRRC18Q8N456 261 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 BCORP1Q8N888 145 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 ZNF615Q8N8J6 731 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 CHST4Q8NCG5 386 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 CCDC54Q8NEL0 328 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 CD300LFQ8TDQ1 290 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 ADAMTS18Q8TE60 1221 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 PCSK5Q92824 1860 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 HIST1H2BHQ93079 126 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 CMBLQ96DG6 245 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 HIST1H2BNQ99877 126 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 HIST1H2BMQ99879 126 aa9.79□□□□□ -0.84
CUX1-204ENST00000393824 PBDC1Q9BVG4 233 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms