RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 IGKV1-12A0A0C4DH73 117 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 NAP1L6A6NFF2 107 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 C16orf97H3BN30 126 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 IGKV1D-12P01611 117 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 HIST1H1DP16402 221 aaKnown RBP7.4□□□□□ -1.22
TDP1-203ENST00000393454 CPT2P23786 658 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 GCH1P30793 250 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 BTCP35070 178 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 FAUP35544 74 aaKnown RBP7.4□□□□□ -1.22
TDP1-203ENST00000393454 FABP6P51161 128 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 TMEM50BP56557 158 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 ARFRP1Q13795 201 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 ALKBH6Q3KRA9 238 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 ZNF718Q3SXZ3 478 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 PLA1AQ53H76 456 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 PLAC9Q5JTB6 97 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 NKAPLQ5M9Q1 402 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 FAAP20Q6NZ36 180 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 ASCL4Q6XD76 172 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 OSR2Q8N2R0 312 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 RELL2Q8NC24 303 aaPredicted RBP7.4□□□□□ -1.22
TDP1-203ENST00000393454 ST6GALNAC3Q8NDV1 305 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 PXT1Q8NFP0 134 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 SLAMF9Q96A28 289 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 MARS2Q96GW9 593 aaKnown RBP7.4□□□□□ -1.22
TDP1-203ENST00000393454 RADILQ96JH8 1075 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 MICU1Q9BPX6 476 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 NUDT16L1Q9BRJ7 211 aaKnown RBP7.4□□□□□ -1.22
TDP1-203ENST00000393454 IFT46Q9NQC8 304 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 MEMO1Q9Y316 297 aa7.4□□□□□ -1.22
TDP1-203ENST00000393454 OR5B21A6NL26 309 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 INMT-MINDY4F8WBC2 141 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 CCL21O00585 134 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 TIMM8AO60220 97 aaPredicted RBP7.4□□□□□ -1.23
TDP1-203ENST00000393454 CRYAAP02489 173 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 TCRBP04435 133 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 SFTPBP07988 381 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 GSTP1P09211 210 aaKnown RBP7.4□□□□□ -1.23
TDP1-203ENST00000393454 AKAIN1P0CW23 69 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 HLA-DMAP28067 261 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 RCVRNP35243 200 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 GNG3P63215 75 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 SSBP1Q04837 148 aaKnown RBP7.4□□□□□ -1.23
TDP1-203ENST00000393454 IGFBP7Q16270 282 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 TAF9Q16594 264 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 OLFML2AQ68BL7 652 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 HAGHLQ6PII5 290 aaPredicted RBP7.4□□□□□ -1.23
TDP1-203ENST00000393454 ZNF782Q6ZMW2 699 aaPredicted RBP7.4□□□□□ -1.23
TDP1-203ENST00000393454 MKXQ8IYA7 352 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 FBXL14Q8N1E6 418 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 FAM89BQ8N5H3 189 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 ZSCAN4Q8NAM6 433 aaPredicted RBP7.4□□□□□ -1.23
TDP1-203ENST00000393454 CREB3L1Q96BA8 519 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 UPRTQ96BW1 309 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 Q96M66 194 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 DMRTA2Q96SC8 542 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 RTL8AQ9BWD3 113 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 TM2D1Q9BX74 207 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 NKIRAS2Q9NYR9 191 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 NPAP1Q9NZP6 1156 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 SPEF1Q9Y4P9 236 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 TPRP12270 2363 aaKnown RBP7.4□□□□□ -1.23
TDP1-203ENST00000393454 ESPL1Q14674 2120 aa7.4□□□□□ -1.23
TDP1-203ENST00000393454 IQCF6A8MYZ5 107 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 ZNF736B4DX44 427 aaPredicted RBP7.39□□□□□ -1.23
TDP1-203ENST00000393454 TRAPPC2LH3BP13 241 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 CD3DP04234 171 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 MELTFP08582 738 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 BCL3P20749 454 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 TUBG1P23258 451 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 CA7P43166 264 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 NPBWR2P48146 333 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 SNU13P55769 128 aaKnown RBP7.39□□□□□ -1.23
TDP1-203ENST00000393454 TAS2R19P59542 299 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 OR8G1Q15617 311 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 PIGYQ3MUY2 71 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 RGS7BPQ6MZT1 257 aaPredicted RBP7.39□□□□□ -1.23
TDP1-203ENST00000393454 STEAP1BQ6NZ63 245 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 ZNF573Q86YE8 665 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 WFDC8Q8IUA0 241 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 GVQW1Q8N7I0 195 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 KDF1Q8NAX2 398 aaPredicted RBP7.39□□□□□ -1.23
TDP1-203ENST00000393454 OR4C16Q8NGL9 310 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 MARVELD1Q9BSK0 173 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 ADAT1Q9BUB4 502 aaKnown RBP7.39□□□□□ -1.23
TDP1-203ENST00000393454 PECRQ9BY49 303 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 TUBG2Q9NRH3 451 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 TMEM100Q9NV29 134 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 NUDT15Q9NV35 164 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 PLEKHJ1Q9NW61 149 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 JKAMPQ9P055 326 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 COPZ2Q9P299 210 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 PURGQ9UJV8 347 aaKnown RBP7.39□□□□□ -1.23
TDP1-203ENST00000393454 ST3GAL6Q9Y274 331 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 NOP16Q9Y3C1 178 aaKnown RBP7.39□□□□□ -1.23
TDP1-203ENST00000393454 NUBP2Q9Y5Y2 271 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 SHANK1Q9Y566 2161 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 IGHV3-64DA0A0J9YX35 117 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 GEMIN2O14893 280 aaKnown RBP7.39□□□□□ -1.23
TDP1-203ENST00000393454 SSX5O60225 188 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms