RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 SLC22A24Q8N4F4 322 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 MRPL24Q96A35 216 aaKnown RBP12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 OR2M4Q96R27 311 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 NIPSNAP3BQ9BS92 247 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 RCL1Q9Y2P8 373 aaKnown RBP12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 SOCS1O15524 211 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 MBPP02686 304 aaPredicted RBP12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 NPSP0C0P6 89 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 PNMTP11086 282 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 GABRR1P24046 479 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 AKT2P31751 481 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 ZP2Q05996 745 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 GAGE1Q13065 139 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 GPR157Q5UAW9 335 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 CYB561D1Q8N8Q1 229 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 KTI12Q96EK9 354 aaPredicted RBP12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 OR52A1Q9UKL2 312 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 CYR61O00622 381 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 DFFBO76075 338 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 IFI6P09912 130 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 HIST1H1DP16402 221 aaKnown RBP12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 AMY2BP19961 511 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 OR3A2P47893 321 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 GLO1Q04760 184 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 DCAF10Q5QP82 559 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 MRGPRX1Q96LB2 322 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 CCNL2Q96S94 520 aaPredicted RBP12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 CDX2Q99626 313 aaPredicted RBP12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 LYRM4Q9HD34 91 aa12.91□□□□□ -0.34
VPS9D1-201ENST00000389386 LOC101059948A0A1B0GTJ6 334 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 A8MVM7 634 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 P2RY10O00398 339 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 IFNA21P01568 189 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 TNFRSF4P43489 277 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 RND2P52198 227 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 ICAM4Q14773 271 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 C1orf140Q5VVS0 124 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 WBP2NLQ6ICG8 309 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 PRSS41Q7RTY9 318 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 BMFQ96LC9 184 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 ABHD14AQ9BUJ0 271 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 CDH20Q9HBT6 801 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 CYP8B1Q9UNU6 501 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 MRPS2Q9Y399 296 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 GPR89AB7ZAQ6 455 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 SLC16A7O60669 478 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 METTL15P1P0C7V9 234 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 GPR89BP0CG08 455 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 PVRP15151 417 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 GNALP38405 381 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 TMEM50BP56557 158 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 TMEM176BQ3YBM2 270 aaPredicted RBP12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 OR52N5Q8NH56 324 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 OR2A5Q96R48 311 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 KIAA1456Q9P272 454 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 SRPK3Q9UPE1 567 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 LIPGQ9Y5X9 500 aa12.9□□□□□ -0.34
VPS9D1-201ENST00000389386 IGLV1-36A0A0B4J1U3 117 aa12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 PRR19A6NJB7 356 aa12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 B4DEV8 164 aa12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 XKRYO14609 159 aa12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 ATXN7O15265 892 aaPredicted RBP12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 SCAF4O95104 1147 aaKnown RBP12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 TK1P04183 234 aa12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 HSPB1P04792 205 aaKnown RBP12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 LINC00614P0C842 121 aa12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 MMP16P51512 607 aa12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 RAB38P57729 211 aa12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 H3F3AP84243 136 aa12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 SAPCD1Q5SSQ6 148 aa12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 OR1P1Q8NH06 330 aa12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 OR4X1Q8NH49 305 aa12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 GABRG3Q99928 467 aa12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 SYT3Q9BQG1 590 aa12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 PRDM6Q9NQX0 595 aa12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 PILRAQ9UKJ1 303 aa12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 WSB1Q9Y6I7 421 aa12.9□□□□□ -0.35
VPS9D1-201ENST00000389386 WDFY4Q6ZS81 3184 aa12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 NSA2O95478 260 aaKnown RBP12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 OR5AC1P0C628 307 aa12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 FUT3P21217 361 aa12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 HLA-DRB3P79483 266 aa12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 FZD2Q14332 565 aa12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 SP5Q6BEB4 398 aaPredicted RBP12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 THNSL2Q86YJ6 484 aa12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 C9orf40Q8IXQ3 194 aa12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 OR8G5Q8NG78 346 aa12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 TAAR8Q969N4 342 aa12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 ST6GALNAC5Q9BVH7 336 aa12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 CBLN4Q9NTU7 201 aa12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 EHFQ9NZC4 300 aa12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 DKKL1Q9UK85 242 aa12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 C14orf166Q9Y224 244 aaKnown RBP12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 MRPS18CQ9Y3D5 142 aaKnown RBP12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 RFNGQ9Y644 331 aa12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 PRSS37A4D1T9 235 aa12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 OR4A8P0C604 315 aa12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 PGA3P0DJD8 388 aa12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 TMEM11P17152 192 aa12.89□□□□□ -0.35
VPS9D1-201ENST00000389386 MRPS11P82912 194 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms