RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 OR51E1Q8TCB6 317 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 ELSPBP1Q96BH3 223 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 RCC1LQ96I51 464 aaKnown RBP13.17□□□□□ -0.3
CTNS-202ENST00000381870 DGAT2Q96PD7 388 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 PITPNC1Q9UKF7 332 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 MARCH11A6NNE9 402 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 ZNF205O95201 554 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 HPNP05981 417 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 ZNF20P17024 532 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 FZD2Q14332 565 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 CST6Q15828 149 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 PRR22Q8IZ63 422 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 OR51T1Q8NGJ9 327 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 SHDQ96IW2 340 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 OR2M4Q96R27 311 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 ZNF701Q9NV72 531 aaPredicted RBP13.16□□□□□ -0.3
CTNS-202ENST00000381870 AK3Q9UIJ7 227 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 MMACHCQ9Y4U1 282 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 EYSQ5T1H1 3165 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 PRSS38A1L453 326 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 HCRTR2O43614 444 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 PNLIPP16233 465 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 ATP6V0CP27449 155 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 P4HA3Q7Z4N8 544 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 TMEM183AQ8IXX5 376 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 ARHGEF39Q8N4T4 335 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 OR5D18Q8NGL1 313 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 BAHD1Q8TBE0 780 aaPredicted RBP13.16□□□□□ -0.3
CTNS-202ENST00000381870 SCARF2Q96GP6 870 aaPredicted RBP13.16□□□□□ -0.3
CTNS-202ENST00000381870 THOC3Q96J01 351 aaKnown RBP13.16□□□□□ -0.3
CTNS-202ENST00000381870 ACTR3CQ9C0K3 210 aaPredicted RBP13.16□□□□□ -0.3
CTNS-202ENST00000381870 KIAA1456Q9P272 454 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 SZT2Q5T011 3432 aa13.16□□□□□ -0.3
CTNS-202ENST00000381870 NUDT14O95848 222 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 IL11P20809 199 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 ANOS1P23352 680 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 PPP1CAP62136 330 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 NFATC4Q14934 902 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 NKAIN1Q4KMZ8 207 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 TSPO2Q5TGU0 170 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 NUP54Q7Z3B4 507 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 COMMD2Q86X83 199 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 C17orf78Q8N4C9 275 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 ZNF321PQ8N8H1 164 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 RNASEH2CQ8TDP1 164 aaKnown RBP13.15□□□□□ -0.3
CTNS-202ENST00000381870 CCDC3Q9BQI4 270 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 TWSG1Q9GZX9 223 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 OR10A2Q9H208 303 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 A0A1W2PQU0 124 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 A6NIZ1 184 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 DHRS7CA6NNS2 312 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 SLC31A1O15431 190 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 CTSDP07339 412 aaPredicted RBP13.15□□□□□ -0.3
CTNS-202ENST00000381870 OR5AC1P0C628 307 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 PCP4P48539 62 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 RAP1BP61224 184 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 HLA-DRB3P79483 266 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 SLC35E3Q7Z769 313 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 RNF133Q8WVZ7 376 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 ADOQ96SZ5 270 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 GPER1Q99527 375 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 VN1R1Q9GZP7 353 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 CLDN16Q9Y5I7 305 aa13.15□□□□□ -0.3
CTNS-202ENST00000381870 DXOO77932 396 aaKnown RBP13.14□□□□□ -0.31
CTNS-202ENST00000381870 CLPSP04118 112 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 BLVRBP30043 206 aaPredicted RBP13.14□□□□□ -0.31
CTNS-202ENST00000381870 PIGPP57054 158 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 ZNF880Q6PDB4 577 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 PSRC1Q6PGN9 363 aaPredicted RBP13.14□□□□□ -0.31
CTNS-202ENST00000381870 SPRED2Q7Z698 418 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 OR4X1Q8NH49 305 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 OR1E3Q8WZA6 343 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 SLAMF6Q96DU3 332 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 TMEM106CQ9BVX2 250 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 LIME1Q9H400 295 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 TCFL5Q9UL49 500 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 PADI1Q9ULC6 663 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 PLPP3O14495 311 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 HSPB1P04792 205 aaKnown RBP13.14□□□□□ -0.31
CTNS-202ENST00000381870 DBHP09172 617 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 PGA3P0DJD8 388 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 PPM1FP49593 454 aaPredicted RBP13.14□□□□□ -0.31
CTNS-202ENST00000381870 EWSR1Q01844 656 aaKnown RBP eCLIP13.14□□□□□ -0.31
CTNS-202ENST00000381870 FUT7Q11130 342 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 C2orf27AQ580R0 203 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 COL13A1Q5TAT6 717 aaPredicted RBP13.14□□□□□ -0.31
CTNS-202ENST00000381870 TANGO2Q6ICL3 276 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 KLHL24Q6TFL4 600 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 C1QL2Q7Z5L3 287 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 GPR137CQ8N3F9 429 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 SNIP1Q8TAD8 396 aaKnown RBP13.14□□□□□ -0.31
CTNS-202ENST00000381870 STT3BQ8TCJ2 826 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 PATE1Q8WXA2 126 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 TSACCQ96A04 125 aaPredicted RBP13.14□□□□□ -0.31
CTNS-202ENST00000381870 HDHD3Q9BSH5 251 aaPredicted RBP13.14□□□□□ -0.31
CTNS-202ENST00000381870 URM1Q9BTM9 101 aaKnown RBP13.14□□□□□ -0.31
CTNS-202ENST00000381870 CRISPLD2Q9H0B8 497 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 CBLN4Q9NTU7 201 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 HSF4Q9ULV5 492 aa13.14□□□□□ -0.31
CTNS-202ENST00000381870 CBY1Q9Y3M2 126 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms