RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 ANKRD55Q3KP44 614 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 PLPP5Q8NEB5 264 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 MRPL24Q96A35 216 aaKnown RBP10.06□□□□□ -0.8
SMAD9-202ENST00000379826 OR10C1Q96KK4 312 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 OXGR1Q96P68 337 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 SPIN2AQ99865 258 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 SPIN2BQ9BPZ2 258 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 ZPBPQ9BS86 351 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 TGIF2Q9GZN2 237 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 G6PC2Q9NQR9 355 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 ZNF724A8MTY0 619 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 EFSO43281 561 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 OR5AC1P0C628 307 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 FAHD2BQ6P2I3 314 aaPredicted RBP10.06□□□□□ -0.8
SMAD9-202ENST00000379826 OR13G1Q8NGZ3 307 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 CPT1CQ8TCG5 803 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 FAHD2AQ96GK7 314 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 HES7Q9BYE0 225 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 GFOD1Q9NXC2 390 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 H3BMH7 237 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 EDN3P14138 238 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 CCR5P51681 352 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 HIST2H3PS2Q5TEC6 136 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 DPPA2Q7Z7J5 298 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 ARHGEF39Q8N4T4 335 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 RNF222A6NCQ9 220 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 MPTX1A8MV57 137 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 CSRP2Q16527 193 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 WDR5BQ86VZ2 330 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 CA5BP1Q8WTZ4 195 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 DYNLRB1Q9NP97 96 aa10.06□□□□□ -0.8
SMAD9-202ENST00000379826 KIAA1671Q9BY89 1806 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 ADAM10O14672 748 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 H2AFB1P0C5Y9 115 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 SPINK2P20155 84 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 ECI1P42126 302 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 TGIF1Q15583 401 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 OR5B12Q96R08 314 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 KLHDC3Q9BQ90 382 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 PIGQQ9BRB3 760 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 MMP24Q9Y5R2 645 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 TK1P04183 234 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 NKX2-1P43699 371 aaPredicted RBP10.05□□□□□ -0.8
SMAD9-202ENST00000379826 FASLGP48023 281 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 GSK3AP49840 483 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 RAB11AP62491 216 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 PABPC1L2AQ5JQF8 200 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 ZNF684Q5T5D7 378 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 OR2A2Q6IF42 318 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 GPR137BO60478 399 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 MRPL21Q7Z2W9 205 aaKnown RBP10.05□□□□□ -0.8
SMAD9-202ENST00000379826 NECAP1Q8NC96 275 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 SCARF2Q96GP6 870 aaPredicted RBP10.05□□□□□ -0.8
SMAD9-202ENST00000379826 NRIP2Q9BQI9 281 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 ADAM19Q9H013 955 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 RAB33BQ9H082 229 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 A0A0U1RQK1 487 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 A0A1W2PPE2 198 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 C5orf67F2Z3F1 127 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 EIF3GO75821 320 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMAD9-202ENST00000379826 SLC34A2O95436 690 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 CD8AP01732 235 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 HPNP05981 417 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 GDF1P27539 372 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 FHL1Q13642 323 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 NKAIN1Q4KMZ8 207 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 SHEQ5VZ18 495 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 HOGA1Q86XE5 327 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 C15orf54Q8N8G6 183 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 BHLHE23Q8NDY6 225 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 ZNF519Q8TB69 540 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 SP7Q8TDD2 431 aaPredicted RBP10.05□□□□□ -0.8
SMAD9-202ENST00000379826 RNF133Q8WVZ7 376 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 DMRTA2Q96SC8 542 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 SUCNR1Q9BXA5 334 aa10.05□□□□□ -0.8
SMAD9-202ENST00000379826 CD300LBA8K4G0 201 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 HS3ST1O14792 307 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 IFNA1P01562 189 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 FSTP19883 344 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 UBE2NP61088 152 aaKnown RBP10.04□□□□□ -0.8
SMAD9-202ENST00000379826 ETV3LQ6ZN32 361 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 ZNF845Q96IR2 970 aaPredicted RBP10.04□□□□□ -0.8
SMAD9-202ENST00000379826 PLEKHA2Q9HB19 425 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 FSCN3Q9NQT6 498 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 GNG13Q9P2W3 67 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 TCF20Q9UGU0 1960 aaKnown RBP10.04□□□□□ -0.8
SMAD9-202ENST00000379826 CST7O76096 145 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 IGHV4-34P06331 123 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 RBP2P50120 134 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 ZNF266Q14584 549 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 VASH2Q86V25 355 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 OR8U1Q8NH10 309 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 OR51H1Q8NH63 302 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 RRNAD1Q96FB5 475 aaKnown RBP10.04□□□□□ -0.8
SMAD9-202ENST00000379826 MRGPRX4Q96LA9 322 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 NIPSNAP3BQ9BS92 247 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 TRIOBPQ9H2D6 2365 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 S100A8P05109 93 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 LPAR6P43657 344 aa10.04□□□□□ -0.8
SMAD9-202ENST00000379826 ELLP55199 621 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms