RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 WDR13Q9H1Z4 485 aa16.85■□□□□ 0.29
SSU72-204ENST00000378726 PLSCR2Q9NRY7 297 aa16.85■□□□□ 0.29
SSU72-204ENST00000378726 GLRX2Q9NS18 164 aa16.85■□□□□ 0.29
SSU72-204ENST00000378726 ZNF503-AS2A6NEH8 195 aa16.85■□□□□ 0.29
SSU72-204ENST00000378726 SS18L1O75177 396 aaPredicted RBP16.85■□□□□ 0.29
SSU72-204ENST00000378726 VSIG8P0DPA2 414 aa16.85■□□□□ 0.29
SSU72-204ENST00000378726 MGMTP16455 207 aa16.85■□□□□ 0.29
SSU72-204ENST00000378726 OR3A2P47893 321 aa16.85■□□□□ 0.29
SSU72-204ENST00000378726 RAB1AP62820 205 aa16.85■□□□□ 0.29
SSU72-204ENST00000378726 PMPCAQ10713 525 aa16.85■□□□□ 0.29
SSU72-204ENST00000378726 Q6ZS92 163 aa16.85■□□□□ 0.29
SSU72-204ENST00000378726 SLC25A32Q9H2D1 315 aa16.85■□□□□ 0.29
SSU72-204ENST00000378726 IFT46Q9NQC8 304 aa16.85■□□□□ 0.29
SSU72-204ENST00000378726 METTL21EPA6NDL7 271 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 APOC3P02656 99 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 UBBP0CG47 229 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 ACKR3P25106 362 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 RPS27AP62979 156 aaKnown RBP16.84■□□□□ 0.29
SSU72-204ENST00000378726 UBA52P62987 128 aaKnown RBP16.84■□□□□ 0.29
SSU72-204ENST00000378726 QRFPP83859 136 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 UNC119Q13432 240 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 GLIPR1L1Q6UWM5 242 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 ZNF101Q8IZC7 436 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 SSC4DQ8WTU2 575 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 NPRL2Q8WTW4 380 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 FAM46BQ96A09 425 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 SLC25A21Q9BQT8 299 aaPredicted RBP16.84■□□□□ 0.29
SSU72-204ENST00000378726 CHST5Q9GZS9 411 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 MRPS28Q9Y2Q9 187 aaKnown RBP16.84■□□□□ 0.29
SSU72-204ENST00000378726 LOC100509620A0A075B734 347 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 OR5H14A6NHG9 310 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 K7EM74 188 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 IL18BPO95998 194 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 CSN2P05814 226 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 PRF1P14222 555 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 CCNOP22674 350 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 ARR3P36575 388 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 OR3A4PP47883 348 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 DHRS2Q13268 280 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 SCGB2B2Q4G0G5 96 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 GCNT2Q8N0V5 402 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 BPIFB2Q8N4F0 458 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 OR13C8Q8NGS7 320 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 OR10K1Q8NGX5 313 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 SLC6A7Q99884 636 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 RASL12Q9NYN1 266 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 ATPIF1Q9UII2 106 aa16.84■□□□□ 0.29
SSU72-204ENST00000378726 DHRS7CA6NNS2 312 aa16.83■□□□□ 0.28
SSU72-204ENST00000378726 CCSO14618 274 aa16.83■□□□□ 0.28
SSU72-204ENST00000378726 CD8AP01732 235 aa16.83■□□□□ 0.28
SSU72-204ENST00000378726 PRSS12P56730 875 aa16.83■□□□□ 0.28
SSU72-204ENST00000378726 KISS1Q15726 138 aa16.83■□□□□ 0.28
SSU72-204ENST00000378726 OR4S1Q8NGB4 309 aa16.83■□□□□ 0.28
SSU72-204ENST00000378726 OR5M8Q8NGP6 311 aa16.83■□□□□ 0.28
SSU72-204ENST00000378726 C1QTNF5Q9BXJ0 243 aa16.83■□□□□ 0.28
SSU72-204ENST00000378726 SCPEP1Q9HB40 452 aa16.83■□□□□ 0.28
SSU72-204ENST00000378726 ZNF391Q9UJN7 358 aa16.83■□□□□ 0.28
SSU72-204ENST00000378726 A0A0A6YYH2 397 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 A6NJ64 397 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 ZNF736B4DX44 427 aaPredicted RBP16.82■□□□□ 0.28
SSU72-204ENST00000378726 CYB5AP00167 134 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 CCL2P13500 99 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 CD34P28906 385 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 ZNF92Q03936 586 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 LRRC37A5PQ49AS3 106 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 HIKESHIQ53FT3 197 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 CLVS2Q5SYC1 327 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 OR1K1Q8NGR3 316 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 SEC22AQ96IW7 307 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 RGCCQ9H4X1 137 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 BARX1Q9HBU1 254 aaPredicted RBP16.82■□□□□ 0.28
SSU72-204ENST00000378726 MGAQ8IWI9 3026 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 MED12LQ86YW9 2145 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 SPENQ96T58 3664 aaKnown RBP16.82■□□□□ 0.28
SSU72-204ENST00000378726 A0A0D9SG52 128 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 TMEM235A6NFC5 223 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 CD74P04233 296 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 COX5BP10606 129 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 BEX5Q5H9J7 111 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 FAM214BQ7L5A3 538 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 KCNRGQ8N5I3 272 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 RBMXL3Q8N7X1 1067 aaKnown RBP16.82■□□□□ 0.28
SSU72-204ENST00000378726 ACBD4Q8NC06 268 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 MYOZ1Q9NP98 299 aaPredicted RBP16.82■□□□□ 0.28
SSU72-204ENST00000378726 FBLN5Q9UBX5 448 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 VSIG4Q9Y279 399 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 SSUH2Q9Y2M2 353 aa16.82■□□□□ 0.28
SSU72-204ENST00000378726 C5orf49A4QMS7 147 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 TMEM14DPA8MWL7 114 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 LUMP51884 338 aaPredicted RBP16.81■□□□□ 0.28
SSU72-204ENST00000378726 FAM3AP98173 230 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 NKPD1Q17RQ9 610 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 COLCA1Q6ZS62 124 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 BCL2L2Q92843 193 aaPredicted RBP16.81■□□□□ 0.28
SSU72-204ENST00000378726 ZNF75AQ96N20 296 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 GPR173Q9NS66 373 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 NOP16Q9Y3C1 178 aaKnown RBP16.81■□□□□ 0.28
SSU72-204ENST00000378726 DOCK7Q96N67 2140 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 WIPF3A6NGB9 483 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 AHRRA9YTQ3 701 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms