RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 PRSS35Q8N3Z0 413 aa13.89□□□□□ -0.19
HMGN4-201ENST00000377575 LY6G5BQ8NDX9 201 aa13.89□□□□□ -0.19
HMGN4-201ENST00000377575 C8orf46Q8TAG6 207 aa13.89□□□□□ -0.19
HMGN4-201ENST00000377575 C10orf35Q96D05 121 aa13.89□□□□□ -0.19
HMGN4-201ENST00000377575 Q96MT0 163 aa13.89□□□□□ -0.19
HMGN4-201ENST00000377575 DUX5Q96PT3 197 aa13.89□□□□□ -0.19
HMGN4-201ENST00000377575 IGKV1D-17A0A075B6S4 117 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 J3QRE1 110 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 SLC16A6O15403 523 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 BAG2O95816 211 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 SERPINA3P01011 423 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 RNASE1P07998 156 aaKnown RBP13.88□□□□□ -0.19
HMGN4-201ENST00000377575 PGA5P0DJD9 388 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 PSG2P11465 335 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 NDUFB7P17568 137 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 ZNF91Q05481 1191 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 DGUOKQ16854 277 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 RUSC1-AS1Q66K80 236 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 ACP7Q6ZNF0 438 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 VMO1Q7Z5L0 202 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 ENTHD1Q8IYW4 607 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 ACBD7Q8N6N7 88 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 LHX4Q969G2 390 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 ZDHHC16Q969W1 377 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 C1orf147Q96MC9 270 aaPredicted RBP13.88□□□□□ -0.19
HMGN4-201ENST00000377575 SLC29A1Q99808 456 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 PKIBQ9C010 78 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 CHST5Q9GZS9 411 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 ZNF222Q9UK12 451 aa13.88□□□□□ -0.19
HMGN4-201ENST00000377575 IGHV1-69DA0A0B4J2H0 117 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 CENPVL3A0A0U1RRI6 287 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 LOC100130705A0A1B0GUX0 176 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 MDFIC2A0A1B0GVS7 189 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 A0A1W2PQ09 198 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 H3BSH0 61 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 SYNGR1O43759 233 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 NOS1APO75052 506 aaPredicted RBP13.87□□□□□ -0.19
HMGN4-201ENST00000377575 NXPH2O95156 264 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 IGHV1-69P01742 117 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 TFF1P04155 84 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 HTR1AP08908 422 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 DBTP11182 482 aaKnown RBP13.87□□□□□ -0.19
HMGN4-201ENST00000377575 GABRB1P18505 474 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 MPZP25189 248 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 KIR3DL2P43630 455 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 CNN3Q15417 329 aaKnown RBP13.87□□□□□ -0.19
HMGN4-201ENST00000377575 SLC9A3R2Q15599 337 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 DEFB112Q30KQ8 113 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 TMEM244Q5VVB8 128 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 TMEM185AQ8NFB2 350 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 OR2G2Q8NGZ5 317 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 TRMT10AQ8TBZ6 339 aaKnown RBP13.87□□□□□ -0.19
HMGN4-201ENST00000377575 PP6455Q8WZ26 134 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 LGALS12Q96DT0 336 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 SDSLQ96GA7 329 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 RDH12Q96NR8 316 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 NOX4Q9NPH5 578 aa13.87□□□□□ -0.19
HMGN4-201ENST00000377575 EXOGQ9Y2C4 368 aaKnown RBP13.87□□□□□ -0.19
HMGN4-201ENST00000377575 SOX21Q9Y651 276 aaPredicted RBP13.87□□□□□ -0.19
HMGN4-201ENST00000377575 TENM1Q9UKZ4 2725 aa13.86□□□□□ -0.19
HMGN4-201ENST00000377575 TRBV23-1A0A0A0MS06 115 aa13.86□□□□□ -0.19
HMGN4-201ENST00000377575 FAM230AA0A1W2PPH8 454 aa13.86□□□□□ -0.19
HMGN4-201ENST00000377575 SLC1A7O00341 560 aa13.86□□□□□ -0.19
HMGN4-201ENST00000377575 CAPZA1P52907 286 aa13.86□□□□□ -0.19
HMGN4-201ENST00000377575 OR12D2P58182 307 aa13.86□□□□□ -0.19
HMGN4-201ENST00000377575 IL24Q13007 206 aa13.86□□□□□ -0.19
HMGN4-201ENST00000377575 FDX2Q6P4F2 183 aa13.86□□□□□ -0.19
HMGN4-201ENST00000377575 ZNF555Q8NEP9 628 aa13.86□□□□□ -0.19
HMGN4-201ENST00000377575 RHOXF1Q8NHV9 184 aa13.86□□□□□ -0.19
HMGN4-201ENST00000377575 NPRL2Q8WTW4 380 aa13.86□□□□□ -0.19
HMGN4-201ENST00000377575 ZNF488Q96MN9 340 aa13.86□□□□□ -0.19
HMGN4-201ENST00000377575 NRIP2Q9BQI9 281 aa13.86□□□□□ -0.19
HMGN4-201ENST00000377575 PRDM13Q9H4Q3 707 aa13.86□□□□□ -0.19
HMGN4-201ENST00000377575 INPP5EQ9NRR6 644 aa13.86□□□□□ -0.19
HMGN4-201ENST00000377575 FAM118AQ9NWS6 357 aa13.86□□□□□ -0.19
HMGN4-201ENST00000377575 SMPD3Q9NY59 655 aaPredicted RBP13.86□□□□□ -0.19
HMGN4-201ENST00000377575 RFPL4AA6NLU0 287 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 RFPL4AL1F8VTS6 287 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 J3QLW9 94 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 M0R1W7 72 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 HOXA3O43365 443 aaPredicted RBP13.85□□□□□ -0.19
HMGN4-201ENST00000377575 FADS2O95864 444 aaKnown RBP13.85□□□□□ -0.19
HMGN4-201ENST00000377575 ISG15P05161 165 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 HKR1P10072 659 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 ZNF19P17023 458 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 CFPP27918 469 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 CCR9P51686 369 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 FUT6P51993 359 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 GUCA2AQ02747 115 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 RAB40BQ12829 278 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 FOXL1Q12952 345 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 BLMHQ13867 455 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 UBE2V2Q15819 145 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 METAP1DQ6UB28 335 aaPredicted RBP13.85□□□□□ -0.19
HMGN4-201ENST00000377575 ZNF561Q8N587 486 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 C3orf56Q8N813 242 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 ZNRF1Q8ND25 227 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 BORCS8Q96FH0 119 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 C4orf36Q96KX1 117 aa13.85□□□□□ -0.19
HMGN4-201ENST00000377575 ALG8Q9BVK2 526 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms