RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ERRFI1Q9UJM3 462 aaPredicted RBP12.11□□□□□ -0.47
GPC6-201ENST00000377047 XKRY2A2RUG3 117 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 TMPRSS2O15393 492 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 SLC31A2O15432 143 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 FTH1P19P0C7X4 201 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 CTLA4P16410 223 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 IGFBP7Q16270 282 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 PHYHD1Q5SRE7 291 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 OR2W3Q7Z3T1 314 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 DYNC2LI1Q8TCX1 351 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 GAB4Q2WGN9 574 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 TRAT1Q6PIZ9 186 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 SKA3Q8IX90 412 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 MSRB3Q8IXL7 192 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 MRGPRDQ8TDS7 321 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 RPUSD4Q96CM3 377 aaKnown RBP12.1□□□□□ -0.47
GPC6-201ENST00000377047 ADGRL4Q9HBW9 690 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 A0A1B0GTH9 108 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 RAB7AP51149 207 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 SHANK3Q9BYB0 1731 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 TRAV38-1A0A0B4J264 116 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 PDGFAP04085 211 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 SLC25A4P12235 298 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 ACSM6Q6P461 480 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 BTNL8Q6UX41 500 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 UQCC2Q9BRT2 126 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 RAB19A4D1S5 217 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 AKR7A2O43488 359 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 TOX4O94842 621 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 LALBAP00709 142 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 CALCRP30988 508 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 CEACAM3P40198 252 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 NHLRC1Q6VVB1 395 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 ICAM5Q9UMF0 924 aa12.1□□□□□ -0.47
GPC6-201ENST00000377047 ATXN7O15265 892 aaPredicted RBP12.09□□□□□ -0.47
GPC6-201ENST00000377047 AKR1C3P42330 323 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 ZNF90Q03938 601 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 SSBP1Q04837 148 aaKnown RBP12.09□□□□□ -0.47
GPC6-201ENST00000377047 PXDC1Q5TGL8 231 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 TCEAL7Q9BRU2 100 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 A0A1W2PQD3 144 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 FAM157AC9JC47 383 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 SKP2Q13309 424 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 SP6Q3SY56 376 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 C6orf201Q7Z4U5 140 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 SELENOPP49908 381 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 ETFDHQ16134 617 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 RNF165Q6ZSG1 346 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 PTPMT1Q8WUK0 201 aaPredicted RBP12.09□□□□□ -0.47
GPC6-201ENST00000377047 FGF11Q92914 225 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 RBPMSQ93062 196 aaKnown RBP12.09□□□□□ -0.47
GPC6-201ENST00000377047 OR2D2Q9H210 308 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 ZNF205O95201 554 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 MLF1P58340 268 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 ABHD3Q8WU67 409 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 VSTM2LQ96N03 204 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 LIPT2A6NK58 231 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 AQP8O94778 261 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 RRASP10301 218 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 MAGEB1P43366 347 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 COL13A1Q5TAT6 717 aaPredicted RBP12.09□□□□□ -0.47
GPC6-201ENST00000377047 SAP30LQ9HAJ7 183 aa12.09□□□□□ -0.47
GPC6-201ENST00000377047 SLC37A1P57057 533 aa12.08□□□□□ -0.47
GPC6-201ENST00000377047 RPUSD3Q6P087 351 aaKnown RBP12.08□□□□□ -0.47
GPC6-201ENST00000377047 SF3B5Q9BWJ5 86 aaKnown RBP12.08□□□□□ -0.47
GPC6-201ENST00000377047 SEC14L6B5MCN3 397 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 SMIM17P0DL12 118 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 HIST1H1DP16402 221 aaKnown RBP12.08□□□□□ -0.48
GPC6-201ENST00000377047 LPAR6P43657 344 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 THSD4Q6ZMP0 1018 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 SLC25A32Q9H2D1 315 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 OCEL1Q9H607 264 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 CYSLTR2Q9NS75 346 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 NTMQ9P121 344 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 KIAA1217Q5T5P2 1943 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 ZNF727A8MUV8 499 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 SP1P08047 785 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 PNLIPP16233 465 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 KCNJ3P48549 501 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 ZNF441Q8N8Z8 693 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 AKR1E2Q96JD6 320 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 WDR54Q9H977 334 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 SLC35D1Q9NTN3 355 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 MRPS18BQ9Y676 258 aaKnown RBP12.08□□□□□ -0.48
GPC6-201ENST00000377047 A0A1B0GUH1 482 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 DCTN6O00399 190 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 TMEM267Q0VDI3 215 aaPredicted RBP12.08□□□□□ -0.48
GPC6-201ENST00000377047 C1QL3Q5VWW1 255 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 MOGAT3Q86VF5 341 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 COL24A1Q17RW2 1714 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 LRRC3CA6NJW4 275 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 ONECUT2O95948 504 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 PSG6Q00889 435 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 FOXO1Q12778 655 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 HIKESHIQ53FT3 197 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 DEGS2Q6QHC5 323 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 SFTPA2Q8IWL1 248 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 TMEFF2Q9UIK5 374 aaPredicted RBP12.08□□□□□ -0.48
GPC6-201ENST00000377047 TRAPPC4Q9Y296 219 aa12.08□□□□□ -0.48
GPC6-201ENST00000377047 ZNF638Q14966 1978 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms