RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 OSR2Q8N2R0 312 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 OR10V1Q8NGI7 309 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 GPR119Q8TDV5 335 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 PYURFQ96I23 114 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 GPR82Q96P67 336 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 ZNF300Q96RE9 604 aaPredicted RBP6.94□□□□□ -1.3
USP48-203ENST00000374732 HIST1H2BLQ99880 126 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 WDR27A2RRH5 827 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 SERINC4A6NH21 518 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 J3KR12 359 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 KIR2DS3K7RE56 304 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 F2RL2O00254 374 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 KNG1P01042 644 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 THBDP07204 575 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 SNRPBP14678 240 aaKnown RBP6.94□□□□□ -1.3
USP48-203ENST00000374732 CELP19835 753 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 DCTP40126 519 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 GPR1P46091 355 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 ZNF83P51522 516 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 RHOBP62745 196 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 KIR2DS3Q14952 304 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 RHEBQ15382 184 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 TBC1D28Q2M2D7 210 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 PMS2CLQ68D20 193 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 C22orf42Q6IC83 251 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 HFE2Q6ZVN8 426 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 MAVSQ7Z434 540 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 LRP11Q86VZ4 500 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 BOLLQ8N9W6 283 aaKnown RBP6.94□□□□□ -1.3
USP48-203ENST00000374732 OR2Y1Q8NGV0 311 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 RNF138Q8WVD3 245 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 KIRREL1Q96J84 757 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 CIB3Q96Q77 187 aaPredicted RBP6.94□□□□□ -1.3
USP48-203ENST00000374732 MRPS18AQ9NVS2 196 aaKnown RBP6.94□□□□□ -1.3
USP48-203ENST00000374732 SLC23A2Q9UGH3 650 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 RALYQ9UKM9 306 aaKnown RBP6.94□□□□□ -1.3
USP48-203ENST00000374732 OR51B2Q9Y5P1 312 aa6.94□□□□□ -1.3
USP48-203ENST00000374732 PTPRDP23468 1912 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 KIR2DS1A0A191URI9 304 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 C1orf226A1L170 272 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 CLDN24A6NM45 220 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 DLL1O00548 723 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 OPN1SWP03999 348 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 NGFRP08138 427 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 CD1DP15813 335 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 CTGFP29279 349 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 TGFBR1P36897 503 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 GPR6P46095 362 aaPredicted RBP6.93□□□□□ -1.3
USP48-203ENST00000374732 FOXL1Q12952 345 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 KIR2DS1Q14954 304 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 MORN2Q502X0 79 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 MOB3CQ70IA8 216 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 BEST3Q8N1M1 668 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 TCTEX1D1Q8N7M0 179 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 C8orf31Q8N9H6 132 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 OR8G5Q8NG78 346 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 OR8D1Q8WZ84 308 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 NDRG1Q92597 394 aaKnown RBP6.93□□□□□ -1.3
USP48-203ENST00000374732 LYSMD1Q96S90 227 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 POPDC3Q9HBV1 291 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 MUTYHQ9UIF7 546 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 TRAPPC2LQ9UL33 140 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 KBTBD11-OT1A0A1B0GTJ5 212 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 TOXO94900 526 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 AMY2AP04746 511 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 AMY2BP19961 511 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 CLRN1P58418 232 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 ZIC1Q15915 447 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 C10orf91Q5T1B1 145 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 ADGRF3Q8IZF5 1079 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 KLHDC9Q8NEP7 349 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 LSM5Q9Y4Y9 91 aaKnown RBP6.93□□□□□ -1.3
USP48-203ENST00000374732 NLRC5Q86WI3 1866 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 TANC1Q9C0D5 1861 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 TDRD15B5MCY1 1934 aaKnown RBP6.93□□□□□ -1.3
USP48-203ENST00000374732 FAM72CH0Y354 149 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 DSCR3O14972 297 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 FGF10O15520 208 aaPredicted RBP6.93□□□□□ -1.3
USP48-203ENST00000374732 HSBP1O75506 76 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 RPL35AP18077 110 aaKnown RBP6.93□□□□□ -1.3
USP48-203ENST00000374732 ALOX5APP20292 161 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 KIR2DL2P43627 348 aaPredicted RBP6.93□□□□□ -1.3
USP48-203ENST00000374732 MMDQ15546 238 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 SYPL1Q16563 259 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 C4orf26Q17RF5 130 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 FAM72AQ5TYM5 149 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 LYPLAL1Q5VWZ2 237 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 FAM72DQ6L9T8 149 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 CHRDL2Q6WN34 429 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 FA2HQ7L5A8 372 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 FAM72BQ86X60 149 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 UMODL1-AS1Q8N2C9 162 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 PSMG3Q9BT73 122 aaPredicted RBP6.93□□□□□ -1.3
USP48-203ENST00000374732 TAPBPLQ9BX59 468 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 MBNL3Q9NUK0 354 aaKnown RBP6.93□□□□□ -1.3
USP48-203ENST00000374732 SNX10Q9Y5X0 201 aa6.93□□□□□ -1.3
USP48-203ENST00000374732 CFAP20Q9Y6A4 193 aaKnown RBP6.93□□□□□ -1.3
USP48-203ENST00000374732 ZNF638Q14966 1978 aaKnown RBP6.92□□□□□ -1.3
USP48-203ENST00000374732 ZNF840PA6NDX5 716 aa6.92□□□□□ -1.3
USP48-203ENST00000374732 OR5B21A6NL26 309 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms