RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 CRYAAP02489 173 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 CHRM2P08172 466 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 GNB3P16520 340 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 SELEP16581 610 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 RANBP1P43487 201 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 HAAOP46952 286 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 NPBWR2P48146 333 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 ASCL1P50553 236 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 SNTB2Q13425 540 aaKnown RBP13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 CDNFQ49AH0 187 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 FAM76BQ5HYJ3 339 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 OLFML2AQ68BL7 652 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 SIGIRRQ6IA17 410 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 SLC25A26Q70HW3 274 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 LRP11Q86VZ4 500 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 ZSCAN4Q8NAM6 433 aaPredicted RBP13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 OR51F2Q8NH61 342 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 TMEM171Q8WVE6 324 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 ZC3HAV1LQ96H79 300 aaKnown RBP13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 WFIKKN1Q96NZ8 548 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 HS3ST6Q96QI5 342 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 OR51I2Q9H344 312 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 ELL3Q9HB65 397 aaPredicted RBP13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 RBFOX1Q9NWB1 397 aaKnown RBP13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 MTCH1Q9NZJ7 389 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 CACNA1BQ00975 2339 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 ANKRD20A5PA0PJZ0 165 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 OR5B21A6NL26 309 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 SYNGR1O43759 233 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 HTR3BO95264 441 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 PRSS3P35030 304 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 GLRXP35754 106 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 GNG3P63215 75 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 ZNF718Q3SXZ3 478 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 UNQ6126/PRO20091Q6UXV3 157 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 Q6ZTK2 550 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 C1orf174Q8IYL3 243 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 TOMM5Q8N4H5 51 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 CELF2-AS1Q8N7Q2 184 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 OR8G5Q8NG78 346 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 OR51T1Q8NGJ9 327 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 LILRB4Q8NHJ6 448 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 SLC22A4Q9H015 551 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 FAIMQ9NVQ4 179 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 CACNG2Q9Y698 323 aa13.38□□□□□ -0.27
NIPAL3-204ENST00000374399 NKX2-6A6NCS4 301 aa13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 MEIS3P1A6NDR6 274 aa13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 MFNGO00587 321 aa13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 SSX5O60225 188 aa13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 SCGNO76038 276 aa13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 ZNF250P15622 560 aa13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 MPZP25189 248 aa13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 GRNP28799 593 aaKnown RBP13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 RSU1Q15404 277 aa13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 TMEM200AQ86VY9 491 aa13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 WFDC8Q8IUA0 241 aa13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 SAXO1Q8IYX7 474 aa13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 CHST4Q8NCG5 386 aa13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 ARHGAP5-AS1Q96IT6 56 aa13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 CNTNAP3BQ96NU0 1288 aa13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 S100A13Q99584 98 aa13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 URM1Q9BTM9 101 aaKnown RBP13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 CNTNAP3Q9BZ76 1288 aa13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 MMP28Q9H239 520 aa13.37□□□□□ -0.27
NIPAL3-204ENST00000374399 FAM90A27PA6NNH2 459 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 C3orf80F5H4A9 247 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 SULT1C2O00338 296 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 HIST1H1DP16402 221 aaKnown RBP13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 BCL3P20749 454 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 SLC6A1P30531 599 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 UQCRFS1P47985 274 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 INPP1P49441 399 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 DYRK1AQ13627 763 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 SNTB1Q13884 538 aaKnown RBP13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 PLA1AQ53H76 456 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 RGS7BPQ6MZT1 257 aaPredicted RBP13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 HAGHLQ6PII5 290 aaPredicted RBP13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 BATF2Q8N1L9 274 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 DUSP18Q8NEJ0 188 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 OR56B1Q8NGI3 324 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 SLAMF9Q96A28 289 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 HIST1H2AAQ96QV6 131 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 ADAT1Q9BUB4 502 aaKnown RBP13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 SCPEP1Q9HB40 452 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 ZNF780AO75290 641 aaPredicted RBP13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 LPLP06858 475 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 GTF2F2P13984 249 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 TAF9Q16594 264 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 PIGYQ3MUY2 71 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 ELP2Q6IA86 826 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 FBXL14Q8N1E6 418 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 NUDCD2Q8WVJ2 157 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 ST8SIA4Q92187 359 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 GTF3AQ92664 365 aaKnown RBP13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 RAB3CQ96E17 227 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 HRASLSQ9HDD0 168 aa13.36□□□□□ -0.27
NIPAL3-204ENST00000374399 HCFC1P51610 2035 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 IGLV3-9A0A075B6K5 115 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 RHBDL1O75783 438 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms