RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 PIGMQ9H3S5 423 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 GLS2Q9UI32 602 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 NXT1Q9UKK6 140 aaKnown RBP13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 FAM96BQ9Y3D0 163 aa13.57□□□□□ -0.24
TMEM50A-201ENST00000374358 SERPINE3A8MV23 424 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 FGF16O43320 207 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 LCATP04180 440 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 ZNF32P17041 273 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 OTX2P32243 289 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 ALDH3B1P43353 468 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 CBX5P45973 191 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 SUCLG1P53597 346 aaKnown RBP13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 CYCSP99999 105 aaKnown RBP13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 EXT1Q16394 746 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 RPL7L1Q6DKI1 246 aaKnown RBP13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 RPUSD3Q6P087 351 aaKnown RBP13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 OR2Y1Q8NGV0 311 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 OR14L1PQ8NHC6 308 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 SPTSSAQ969W0 71 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 MARS2Q96GW9 593 aaKnown RBP13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 TSNAXQ99598 290 aaKnown RBP13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 NAA11Q9BSU3 229 aaPredicted RBP13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 AK3Q9UIJ7 227 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 ZNF705EA8MWA4 302 aaPredicted RBP13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 CXCL13O43927 109 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 CRYGSP22914 178 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 ZNF84P51523 738 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 RAC1P63000 192 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 SPEM2Q0P670 501 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 Q0VFX4 171 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 RBM39Q14498 530 aaKnown RBP13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 LPAL2Q16609 132 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 CCDC157Q569K6 752 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 C2orf50Q96LR7 162 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 HRH4Q9H3N8 390 aa13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.56□□□□□ -0.24
TMEM50A-201ENST00000374358 TMEM218A2RU14 115 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 SYNGR3O43761 229 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 ATG12O94817 140 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 VAMP5O95183 116 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 FAM157CP0CG43 387 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 NR2C1P13056 603 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 ID4P47928 161 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 RGS19P49795 217 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 MLF1P58340 268 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 B3GALT5-AS1P59052 145 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 RSU1Q15404 277 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 IAH1Q2TAA2 248 aaPredicted RBP13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 WIPI1Q5MNZ9 446 aaPredicted RBP13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 FAM27BQ5VT28 67 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 SLC23A3Q6PIS1 610 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 CPNE2Q96FN4 548 aaPredicted RBP13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 SULT4A1Q9BR01 284 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 SMIM3Q9BZL3 60 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 SLC6A15Q9H2J7 730 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 GHRLQ9UBU3 117 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 C14orf166Q9Y224 244 aaKnown RBP13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 DNAJC13O75165 2243 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 IGKV1-12A0A0C4DH73 117 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 GEMIN2O14893 280 aaKnown RBP13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 MTRF1O75570 445 aaKnown RBP13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 TRAPPC6AO75865 159 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 IGKV1D-12P01611 117 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 CSTBP04080 98 aaKnown RBP13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 FKBP2P26885 142 aaKnown RBP13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 ZNF133P52736 654 aaPredicted RBP13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 FXYD4P59646 89 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 MST1LQ2TV78 715 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 GGNQ86UU5 652 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 CBLN2Q8IUK8 224 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 MRPL24Q96A35 216 aaKnown RBP13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 SLC5A7Q9GZV3 580 aa13.55□□□□□ -0.24
TMEM50A-201ENST00000374358 ZNF407Q9C0G0 2248 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 CBR3O75828 277 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 SCGB1D2O95969 90 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 CTRB1P17538 263 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 RFC3P40938 356 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 HTR5AP47898 357 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 MRPS34P82930 218 aaKnown RBP13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 CTRB2Q6GPI1 263 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 SULF2Q8IWU5 870 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 ZNF845Q96IR2 970 aaPredicted RBP13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 PARP12Q9H0J9 701 aaKnown RBP13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 AGPAT2O15120 278 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 LRP3O75074 770 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 FBXO24O75426 580 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 IFNA2P01563 188 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 ZNF708P17019 499 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 FOLR3P41439 243 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 IL15RAQ13261 267 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 PDSS1Q5T2R2 415 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 C5orf24Q7Z6I8 188 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 M1APQ8TC57 530 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 RHBDD1Q8TEB9 315 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 ABHD3Q8WU67 409 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 RNF141Q8WVD5 230 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 SCGB3A2Q96PL1 93 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 TLNRD1Q9H1K6 362 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 TMEM100Q9NV29 134 aa13.54□□□□□ -0.24
TMEM50A-201ENST00000374358 ANXA10Q9UJ72 324 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms