RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 FTH1P19P0C7X4 201 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 VSIG10L2P0DP72 767 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 SLC2A1P11166 492 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 GNB3P16520 340 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 FAHP16930 419 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 FUT3P21217 361 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 NUP62P37198 522 aaPredicted RBP7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 MAGEA5P43359 124 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 KIR2DS4P43632 304 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 STARP49675 285 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 SNU13P55769 128 aaKnown RBP7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 ARF1P84077 181 aaKnown RBP7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 SPEM2Q0P670 501 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 PLA2G7Q13093 441 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 KIR2DS1Q14954 304 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 OPCMLQ14982 345 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 RTP5Q14D33 572 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 MOGAT2Q3SYC2 334 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 RPUSD3Q6P087 351 aaKnown RBP7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 MTFR2Q6P444 385 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 INO80CQ6PI98 192 aaPredicted RBP7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 IGFL3Q6UXB1 125 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 GSG1LQ6UXU4 331 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 ACOT7LQ6ZUV0 252 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 MRPL21Q7Z2W9 205 aaKnown RBP7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 INO80EQ8NBZ0 244 aaPredicted RBP7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 ABHD3Q8WU67 409 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 GCDHQ92947 438 aaPredicted RBP7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 WDYHV1Q96HA8 205 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 ALKBH3Q96Q83 286 aaPredicted RBP7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 SEC22CQ9BRL7 303 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 PECRQ9BY49 303 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 PKIBQ9C010 78 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 ZNF552Q9H707 407 aaPredicted RBP7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 IFT22Q9H7X7 185 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 CALHM2Q9HA72 323 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 TREM2Q9NZC2 230 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 ANXA10Q9UJ72 324 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 SDK1Q7Z5N4 2213 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 EML6Q6ZMW3 1958 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 ZDBF2Q9HCK1 2354 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 TRBV6-7A0A0A0MS04 114 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 A0A0G2JMM0 328 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 A0A1W2PNU3 283 aaPredicted RBP7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 A0A1W2PPB8 328 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 A0A1W2PRS3 328 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 PINLYPA6NC86 204 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 OR5H14A6NHG9 310 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 ANKRD30BLA7E2S9 258 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 KIR3DP1A8MWS1 328 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 TAAR5O14804 337 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 SOCS1O15524 211 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 SSX5O60225 188 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 PDCD6O75340 191 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 RAD51DO75771 328 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 CEACAM4O75871 244 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 SFT2D2O95562 160 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 HTR2BP41595 481 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 ARPC4P59998 168 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 RAB1AP62820 205 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 UBA52P62987 128 aaKnown RBP7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 NAAAQ02083 359 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 IL13RA2Q14627 380 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 SNAI3Q3KNW1 292 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 C3orf36Q3SXR2 165 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 PLAC9Q5JTB6 97 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 OR10K2Q6IF99 312 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 EIF5AL1Q6IS14 154 aaKnown RBP7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 C11orf87Q6NUJ2 197 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 LINC00696Q6ZRV3 163 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 TMPRSS7Q7RTY8 843 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 ZNF546Q86UE3 836 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 SGPP2Q8IWX5 399 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 TUSC5Q8IXB3 177 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 ZDHHC23Q8IYP9 409 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 SPERTQ8NA61 448 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 TMEM104Q8NE00 496 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 OR4D10Q8NGI6 311 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 SCARB1Q8WTV0 552 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 FAM216AQ8WUB2 273 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 GALNT14Q96FL9 552 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 ARHGAP5-AS1Q96IT6 56 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 POM121L2Q96KW2 1035 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 PDCD10Q9BUL8 212 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 SUCNR1Q9BXA5 334 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 ZNF286AQ9HBT8 521 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 ASCL3Q9NQ33 180 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 C12orf4Q9NQ89 552 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 C1orf123Q9NWV4 160 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 DNAJB11Q9UBS4 358 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 IL17BQ9UHF5 180 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 SESN1Q9Y6P5 492 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 KIAA1549Q9HCM3 1950 aa7.56□□□□□ -1.2
SNRNP40-202ENST00000373720 TRBV6-6A0A0A6YYG2 114 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 DUXBA0A1W2PPF3 345 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 PQLC2LA1A4F0 135 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 H3BSH0 61 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 M0QYG6 137 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 GOSR2O14653 212 aa7.55□□□□□ -1.2
SNRNP40-202ENST00000373720 IFNA21P01568 189 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms