RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 HAAOP46952 286 aa17.81■□□□□ 0.44
CCDC28B-201ENST00000373602 CATSPERDQ86XM0 798 aa17.81■□□□□ 0.44
CCDC28B-201ENST00000373602 OR10H4Q8NGA5 316 aa17.81■□□□□ 0.44
CCDC28B-201ENST00000373602 PYDC1Q8WXC3 89 aa17.81■□□□□ 0.44
CCDC28B-201ENST00000373602 TNFRSF14Q92956 283 aa17.81■□□□□ 0.44
CCDC28B-201ENST00000373602 SLITRK2Q9H156 845 aa17.81■□□□□ 0.44
CCDC28B-201ENST00000373602 A0A1B0GUS0 222 aa17.8■□□□□ 0.44
CCDC28B-201ENST00000373602 NOS1APO75052 506 aaPredicted RBP17.8■□□□□ 0.44
CCDC28B-201ENST00000373602 SULT1C4O75897 302 aa17.8■□□□□ 0.44
CCDC28B-201ENST00000373602 IGHV4-59P01825 116 aa17.8■□□□□ 0.44
CCDC28B-201ENST00000373602 CDC42P60953 191 aa17.8■□□□□ 0.44
CCDC28B-201ENST00000373602 RPL15P61313 204 aaKnown RBP17.8■□□□□ 0.44
CCDC28B-201ENST00000373602 PRB3Q04118 309 aaPredicted RBP17.8■□□□□ 0.44
CCDC28B-201ENST00000373602 SMIM21Q3B7S5 101 aa17.8■□□□□ 0.44
CCDC28B-201ENST00000373602 PRR31Q5SQ13 230 aa17.8■□□□□ 0.44
CCDC28B-201ENST00000373602 TMEM185AQ8NFB2 350 aa17.8■□□□□ 0.44
CCDC28B-201ENST00000373602 DYRK2Q92630 601 aa17.8■□□□□ 0.44
CCDC28B-201ENST00000373602 RORBQ92753 470 aa17.8■□□□□ 0.44
CCDC28B-201ENST00000373602 RFKQ969G6 155 aa17.8■□□□□ 0.44
CCDC28B-201ENST00000373602 ZNF488Q96MN9 340 aa17.8■□□□□ 0.44
CCDC28B-201ENST00000373602 ELL3Q9HB65 397 aaPredicted RBP17.8■□□□□ 0.44
CCDC28B-201ENST00000373602 C1RLQ9NZP8 487 aa17.8■□□□□ 0.44
CCDC28B-201ENST00000373602 FAM96BQ9Y3D0 163 aa17.8■□□□□ 0.44
CCDC28B-201ENST00000373602 TRBV23-1A0A0A0MS06 115 aa17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 A0A1W2PQ09 198 aa17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 A6NIN4 97 aa17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 RFPL4AA6NLU0 287 aa17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 RFPL4AL1F8VTS6 287 aa17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 NDUFA7O95182 113 aa17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 EEF1B2P24534 225 aaKnown RBP17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 MPZP25189 248 aa17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 ATP6V1E1P36543 226 aa17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 RAG2P55895 527 aa17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 DLX1P56177 255 aa17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 RELBQ01201 579 aa17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 CD177Q8N6Q3 437 aa17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 OR4F5Q8NH21 305 aa17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 TRUB1Q8WWH5 349 aaKnown RBP17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 ZNF696Q9H7X3 374 aa17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 METTL8Q9H825 291 aaKnown RBP17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 POLDIP2Q9Y2S7 368 aa17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 CAB39Q9Y376 341 aaPredicted RBP17.79■□□□□ 0.44
CCDC28B-201ENST00000373602 ANKRD61A6NGH8 418 aa17.78■□□□□ 0.44
CCDC28B-201ENST00000373602 NPFFO15130 113 aa17.78■□□□□ 0.44
CCDC28B-201ENST00000373602 ALPLP05186 524 aa17.78■□□□□ 0.44
CCDC28B-201ENST00000373602 KLRD1Q13241 179 aa17.78■□□□□ 0.44
CCDC28B-201ENST00000373602 BLMHQ13867 455 aa17.78■□□□□ 0.44
CCDC28B-201ENST00000373602 ODF4Q2M2E3 257 aa17.78■□□□□ 0.44
CCDC28B-201ENST00000373602 NCR3LG1Q68D85 454 aa17.78■□□□□ 0.44
CCDC28B-201ENST00000373602 NRIP2Q9BQI9 281 aa17.78■□□□□ 0.44
CCDC28B-201ENST00000373602 DPAGT1Q9H3H5 408 aa17.78■□□□□ 0.44
CCDC28B-201ENST00000373602 BEX1Q9HBH7 125 aa17.78■□□□□ 0.44
CCDC28B-201ENST00000373602 USE1Q9NZ43 259 aa17.78■□□□□ 0.44
CCDC28B-201ENST00000373602 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.78■□□□□ 0.44
CCDC28B-201ENST00000373602 H3BNX3 289 aa17.77■□□□□ 0.44
CCDC28B-201ENST00000373602 SYT7O43581 403 aa17.77■□□□□ 0.44
CCDC28B-201ENST00000373602 GPR137BO60478 399 aa17.77■□□□□ 0.44
CCDC28B-201ENST00000373602 FBP1P09467 338 aa17.77■□□□□ 0.44
CCDC28B-201ENST00000373602 PRDX2P32119 198 aa17.77■□□□□ 0.44
CCDC28B-201ENST00000373602 UBE2E1P51965 193 aa17.77■□□□□ 0.44
CCDC28B-201ENST00000373602 CAPZA1P52907 286 aa17.77■□□□□ 0.44
CCDC28B-201ENST00000373602 ISL1P61371 349 aa17.77■□□□□ 0.44
CCDC28B-201ENST00000373602 ZNF85Q03923 595 aa17.77■□□□□ 0.44
CCDC28B-201ENST00000373602 ZNF561Q8N587 486 aa17.77■□□□□ 0.44
CCDC28B-201ENST00000373602 CCDC54Q8NEL0 328 aa17.77■□□□□ 0.44
CCDC28B-201ENST00000373602 UBE2FQ969M7 185 aa17.77■□□□□ 0.44
CCDC28B-201ENST00000373602 HRASLS5Q96KN8 279 aa17.77■□□□□ 0.44
CCDC28B-201ENST00000373602 PKIBQ9C010 78 aa17.77■□□□□ 0.44
CCDC28B-201ENST00000373602 PLEKHA1Q9HB21 404 aa17.77■□□□□ 0.44
CCDC28B-201ENST00000373602 HES4Q9HCC6 221 aa17.77■□□□□ 0.44
CCDC28B-201ENST00000373602 ZNRD1Q9P1U0 126 aa17.77■□□□□ 0.44
CCDC28B-201ENST00000373602 E9PQ18 207 aa17.76■□□□□ 0.43
CCDC28B-201ENST00000373602 NXPH2O95156 264 aa17.76■□□□□ 0.43
CCDC28B-201ENST00000373602 KPNB1Q14974 876 aaKnown RBP17.76■□□□□ 0.43
CCDC28B-201ENST00000373602 SLC25A30Q5SVS4 291 aa17.76■□□□□ 0.43
CCDC28B-201ENST00000373602 CALHM1Q8IU99 346 aa17.76■□□□□ 0.43
CCDC28B-201ENST00000373602 FAM185AQ8N0U4 392 aa17.76■□□□□ 0.43
CCDC28B-201ENST00000373602 PRSS35Q8N3Z0 413 aa17.76■□□□□ 0.43
CCDC28B-201ENST00000373602 C19orf12Q9NSK7 152 aa17.76■□□□□ 0.43
CCDC28B-201ENST00000373602 IMPAD1Q9NX62 359 aa17.76■□□□□ 0.43
CCDC28B-201ENST00000373602 SLC7A11Q9UPY5 501 aa17.76■□□□□ 0.43
CCDC28B-201ENST00000373602 ORC6Q9Y5N6 252 aa17.76■□□□□ 0.43
CCDC28B-201ENST00000373602 A0A1W2PRD5 423 aa17.75■□□□□ 0.43
CCDC28B-201ENST00000373602 A0A1W2PRF3 423 aa17.75■□□□□ 0.43
CCDC28B-201ENST00000373602 A0A1W2PRM7 423 aa17.75■□□□□ 0.43
CCDC28B-201ENST00000373602 CLPSL1A2RUU4 121 aa17.75■□□□□ 0.43
CCDC28B-201ENST00000373602 H3BSH0 61 aa17.75■□□□□ 0.43
CCDC28B-201ENST00000373602 SLC1A7O00341 560 aa17.75■□□□□ 0.43
CCDC28B-201ENST00000373602 EI24O14681 340 aa17.75■□□□□ 0.43
CCDC28B-201ENST00000373602 KNG1P01042 644 aa17.75■□□□□ 0.43
CCDC28B-201ENST00000373602 ERVK11-1P61568 191 aa17.75■□□□□ 0.43
CCDC28B-201ENST00000373602 IL24Q13007 206 aa17.75■□□□□ 0.43
CCDC28B-201ENST00000373602 UBE2V2Q15819 145 aa17.75■□□□□ 0.43
CCDC28B-201ENST00000373602 TP53I3Q53FA7 332 aa17.75■□□□□ 0.43
CCDC28B-201ENST00000373602 OLFML2AQ68BL7 652 aa17.75■□□□□ 0.43
CCDC28B-201ENST00000373602 ZFP1Q6P2D0 407 aa17.75■□□□□ 0.43
CCDC28B-201ENST00000373602 CCDC121Q6ZUS5 278 aa17.75■□□□□ 0.43
CCDC28B-201ENST00000373602 FAM220AQ7Z4H9 259 aa17.75■□□□□ 0.43
CCDC28B-201ENST00000373602 ANGPTL5Q86XS5 388 aa17.75■□□□□ 0.43
CCDC28B-201ENST00000373602 PNKDQ8N490 385 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms