RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 BOD1Q96IK1 185 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 MS4A8Q9BY19 250 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 LANCL2Q9NS86 450 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 Q9Y3F1 56 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 TUBGCP6Q96RT7 1819 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 SNED1Q8TER0 1413 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 DYNLT3P51808 116 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 LGALSLQ3ZCW2 172 aaPredicted RBP13.77□□□□□ -0.21
COL5A1-201ENST00000371817 TMEM136Q6ZRR5 245 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 SPACA9Q96E40 222 aaPredicted RBP13.77□□□□□ -0.21
COL5A1-201ENST00000371817 VN1R1Q9GZP7 353 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 DDX60Q8IY21 1712 aaKnown RBP13.77□□□□□ -0.21
COL5A1-201ENST00000371817 SCN11AQ9UI33 1791 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 SH2D7A6NKC9 451 aaPredicted RBP13.77□□□□□ -0.21
COL5A1-201ENST00000371817 RAB32Q13637 225 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 XAF1Q6GPH4 301 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 C5orf17Q8NAS9 161 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 FAHD2AQ96GK7 314 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 SMDT1Q9H4I9 107 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 MARCH5Q9NX47 278 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 DRGXA6NNA5 263 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 ABLIM3O94929 683 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 GLRA1P23415 457 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 WNT3P56703 355 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 CD226Q15762 336 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 ZNF141Q15928 474 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 CYB5R2Q6BCY4 276 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 SSX8Q7RTT4 187 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 OR5M9Q8NGP3 310 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 MTFP1Q9UDX5 166 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 TMEM131LA2VDJ0 1609 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 TMEM265A0A087WTH1 108 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 TCRBV5S2A0A599 114 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 MBLAC1A4D2B0 266 aaPredicted RBP13.76□□□□□ -0.21
COL5A1-201ENST00000371817 ZNF716A6NP11 495 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 HMGN4O00479 90 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 HCRTR1O43613 425 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 HHIPQ96QV1 700 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 RAB33BQ9H082 229 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 PRSS38A1L453 326 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 ACRP10323 421 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 FGF9P31371 208 aaPredicted RBP13.76□□□□□ -0.21
COL5A1-201ENST00000371817 IL24Q13007 206 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 DNLZQ5SXM8 178 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 SLC48A1Q6P1K1 146 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 SLCO4C1Q6ZQN7 724 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 RIMKLAQ8IXN7 391 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 MCM3APO60318 1980 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 APOBEC1P41238 236 aaKnown RBP13.76□□□□□ -0.21
COL5A1-201ENST00000371817 PNLIPRP2P54317 469 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 SP6Q3SY56 376 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 TRAT1Q6PIZ9 186 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 ZGRF1Q86YA3 2104 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 TMEM25Q86YD3 366 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 TGIF2LYQ8IUE0 185 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 RDH5Q92781 318 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 TMEM140Q9NV12 185 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 FOXJ2Q9P0K8 574 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 PLEKHB1Q9UF11 243 aaPredicted RBP13.76□□□□□ -0.21
COL5A1-201ENST00000371817 OPRK1P41145 380 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 XKR7Q5GH72 579 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 DGAT2L7PQ6IED9 249 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 SPNS3Q6ZMD2 512 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 RABEPKQ7Z6M1 372 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 ADAMTS17Q8TE56 1095 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 SLC25A33Q9BSK2 321 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 SIRPB1O00241 398 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 AKR7A3O95154 331 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 SRP14P37108 136 aaKnown RBP13.76□□□□□ -0.21
COL5A1-201ENST00000371817 CRYBB2P43320 205 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 SPATA6Q9NWH7 488 aaPredicted RBP13.76□□□□□ -0.21
COL5A1-201ENST00000371817 IL10RAQ13651 578 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 GOT1L1Q8NHS2 421 aaPredicted RBP13.76□□□□□ -0.21
COL5A1-201ENST00000371817 PBOV1Q9GZY1 135 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.76□□□□□ -0.21
COL5A1-201ENST00000371817 IER3P46695 156 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 Q7L0L9 218 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 ARIH2OSQ8N7S6 290 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 SLC16A11Q8NCK7 471 aa13.76□□□□□ -0.21
COL5A1-201ENST00000371817 A0A0U1RQS6 177 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 TAPBPO15533 448 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 GABRA1P14867 456 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 NKAIN1Q4KMZ8 207 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 PRAMEF20Q5VT98 475 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 NUFIP2Q7Z417 695 aaKnown RBP13.75□□□□□ -0.21
COL5A1-201ENST00000371817 UTP23Q9BRU9 249 aaKnown RBP13.75□□□□□ -0.21
COL5A1-201ENST00000371817 IGSF23A1L1A6 192 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 BTG2P78543 158 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 MPV17LQ2QL34 196 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 HSPB9Q9BQS6 159 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 TMEM167BQ9NRX6 74 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 H7C2G1 150 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 SMAD6O43541 496 aaKnown RBP13.75□□□□□ -0.21
COL5A1-201ENST00000371817 TCEAL8Q8IYN2 117 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 MOB3AQ96BX8 217 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 IER2Q9BTL4 223 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 ICAM5Q9UMF0 924 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 SOX15O60248 233 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 IGSF21Q96ID5 467 aa13.75□□□□□ -0.21
COL5A1-201ENST00000371817 P01737 135 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms