RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 CBX5P45973 191 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 RPS27AP62979 156 aaKnown RBP10.23□□□□□ -0.77
PDE6C-201ENST00000371447 MRPS34P82930 218 aaKnown RBP10.23□□□□□ -0.77
PDE6C-201ENST00000371447 ZNF239Q16600 458 aaKnown RBP10.23□□□□□ -0.77
PDE6C-201ENST00000371447 SLC25A26Q70HW3 274 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 ZNF2Q9BSG1 426 aaPredicted RBP10.23□□□□□ -0.77
PDE6C-201ENST00000371447 C5orf66Q9H5L9 145 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 SH2D2AQ9NP31 389 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 PARPBPQ9NWS1 579 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 ACACAQ13085 2346 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 KANTRA0A1W2PQU2 76 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 MEX3AA1L020 520 aaKnown RBP10.23□□□□□ -0.77
PDE6C-201ENST00000371447 TTLL8A6PVC2 850 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 EDN3P14138 238 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 CTRB1P17538 263 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 ZBTB25P24278 435 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 SCRN3Q0VDG4 424 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 KIAA2026Q5HYC2 2103 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 CTRB2Q6GPI1 263 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 SLC51BQ86UW2 128 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 ZNF100Q8IYN0 542 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 OR5M8Q8NGP6 311 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 OR13G1Q8NGZ3 307 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 OR51F2Q8NH61 342 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 CDC6Q99741 560 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 CHST5Q9GZS9 411 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 ZNF442Q9H7R0 627 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 GPR160Q9UJ42 338 aa10.23□□□□□ -0.77
PDE6C-201ENST00000371447 DIDO1Q9BTC0 2240 aaKnown RBP10.22□□□□□ -0.77
PDE6C-201ENST00000371447 SPAARA0A1B0GVQ0 90 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 NGFP01138 241 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 FKBP2P26885 142 aaKnown RBP10.22□□□□□ -0.77
PDE6C-201ENST00000371447 FOXO1Q12778 655 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 AANATQ16613 207 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 C10orf128Q5T292 105 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 CLEC18BQ6UXF7 455 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 SLC25A42Q86VD7 318 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 INO80EQ8NBZ0 244 aaPredicted RBP10.22□□□□□ -0.77
PDE6C-201ENST00000371447 UBALD1Q8TB05 177 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 OR2H1Q9GZK4 316 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 WNT5BQ9H1J7 359 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 TIMM10BQ9Y5J6 103 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 ESPL1Q14674 2120 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 SYNGR4O95473 234 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 CNR1P21554 472 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 NPBWR2P48146 333 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 TMEM251Q8N6I4 163 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 HAS2Q92819 552 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 DHRS9Q9BPW9 319 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 CMSS1Q9BQ75 279 aaKnown RBP10.22□□□□□ -0.77
PDE6C-201ENST00000371447 TTTY12Q9BZ98 90 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 SMIM3Q9BZL3 60 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 CRIM1Q9NZV1 1036 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 LIPGQ9Y5X9 500 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 COL5A1P20908 1838 aaPredicted RBP10.22□□□□□ -0.77
PDE6C-201ENST00000371447 A0A0A6YYH2 397 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 A6NJ64 397 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 SYNGR3O43761 229 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 CPT2P23786 658 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 GSK3AP49840 483 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 NOVA1P51513 510 aaKnown RBP10.22□□□□□ -0.77
PDE6C-201ENST00000371447 CCL11P51671 97 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 PPIAP62937 165 aaKnown RBP10.22□□□□□ -0.77
PDE6C-201ENST00000371447 ARG2P78540 354 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 TSC22D1Q15714 1073 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 ZNF660Q6AZW8 331 aaPredicted RBP10.22□□□□□ -0.77
PDE6C-201ENST00000371447 PARP12Q9H0J9 701 aaKnown RBP10.22□□□□□ -0.77
PDE6C-201ENST00000371447 METTL9Q9H1A3 318 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 SDHAF2Q9NX18 166 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 ST3GAL6Q9Y274 331 aa10.22□□□□□ -0.77
PDE6C-201ENST00000371447 CEP295Q9C0D2 2601 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 CUL9Q8IWT3 2517 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 RFPL4AA6NLU0 287 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 RFPL4AL1F8VTS6 287 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 MFNGO00587 321 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 WISP2O76076 250 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 GP1BAP07359 652 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 THBS4P35443 961 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 RBP2P50120 134 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 GPM6AP51674 278 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 RAB35Q15286 201 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 KCNMB1Q16558 191 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 HIKESHIQ53FT3 197 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 ZNF529Q6P280 563 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 CALHM1Q8IU99 346 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 OR52H1Q8NGJ2 320 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 PTX4Q96A99 478 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 ZNF488Q96MN9 340 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 LINC00052Q96N35 136 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 IL36RNQ9UBH0 155 aa10.21□□□□□ -0.77
PDE6C-201ENST00000371447 ATMQ13315 3056 aa10.21□□□□□ -0.78
PDE6C-201ENST00000371447 ZNF503-AS2A6NEH8 195 aa10.21□□□□□ -0.78
PDE6C-201ENST00000371447 ANKRD55Q3KP44 614 aa10.21□□□□□ -0.78
PDE6C-201ENST00000371447 C11orf87Q6NUJ2 197 aa10.21□□□□□ -0.78
PDE6C-201ENST00000371447 OR56B2PQ8NGI1 322 aa10.21□□□□□ -0.78
PDE6C-201ENST00000371447 KCNE4Q8WWG9 221 aa10.21□□□□□ -0.78
PDE6C-201ENST00000371447 PP6455Q8WZ26 134 aa10.21□□□□□ -0.78
PDE6C-201ENST00000371447 SULT4A1Q9BR01 284 aa10.21□□□□□ -0.78
PDE6C-201ENST00000371447 TRAF4Q9BUZ4 470 aaPredicted RBP10.21□□□□□ -0.78
PDE6C-201ENST00000371447 B4GALT7Q9UBV7 327 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms